Publications 2022 thanks to CEMEB fundings

F Alfieri, L Botton-Divet, JA Nyakatura, E Amson (2022) Integrative Approach Uncovers New Patterns of Ecomorphological Convergence in Slow Arboreal Xenarthrans. Journal of Mammalian Evolution 29 (2): 283-312. [Plateforme Microtomographie RX]

R Araujo, R David, J Benoit, L Jacqueline, F Spoor, A Stoessel, P Barrett, J Maisano, E Ekdale, M Orliac, ZX Luo, A Martinelli, E Hoffman, C Sidor, R Martins, K Angielczyk (2022) Inner ear biomechanics reveals a Late Triassic origin for mammalian endothermy. Nature 607 (7920): 726-+. [Projet exploratoire Cemeb & Plateforme Microtomographie RX]

A Assemat, S Adnet, K Bayez, A Hassler, F Arnaud-Godet, FH Mollen, C Girard, JE Martin (2022) Exploring diet shifts and ecology in modern sharks using calcium isotopes and trace metal records of their teeth. Journal of Fish Biology n/a (n/a):  [Projet exploratoire Cemeb]

C Bader, C Böhmer, M Abou, A Houssaye (2022) How does bone microanatomy and musculature covary? An investigation in the forelimb of two species of martens (Martes foina, Martes martes). Journal of Anatomy 241 (1): 145-167. [Plateforme Microtomographie RX]

AM Balcarcel, D Bastiaans, MJ Orliac (2022) Endocranial Casts of Camelops hesternus and Palaeolama sp.: New Insights into the Recent History of the Camelid Brain. Brain, Behavior and Evolution:  [Plateforme Microtomographie RX]

P Barry, T Broquet, PA Gagnaire (2022) Age‐specific survivorship and fecundity shape genetic diversity in marine fishes. Evolution Letters 6 (1): 46-62. [Plateforme MBB]

M Barthe, C Doutrelant, R Covas, M Melo, JC Illera, M-K Tilak, C Colombier, T Leroy, C Loiseau, B Nabholz (2022) Evolution of immune genes in island birds: reduction in population sizes can explain island syndrome. Peer Community Journal 2:  [Projet exploratoire Cemeb]

N Bech, D Nivelle, S Caron, J Ballouard, V Arnal, D Arsovski, A Golubović, X Bonnet, C Montgelard (2022) Extent of introgressive hybridization in the Hermann's tortoise (Testudo hermanni hermanni) from the south of France. European Journal of Wildlife Research 68 (3): 37. [Plateforme GenSeq]

F Berio, Y Bayle, D Baum, N Goudemand, M Debiais-Thibaud (2022) Hide and seek shark teeth in Random Forests: machine learning applied to Scyliorhinus canicula populations. PeerJ 10: e13575. [Plateforme Microtomographie RX]

J Biquet, S Bonamour, P De Villemereuil, C De Franceschi, T, C Teplitski (2022) Phenotypic plasticity drives phenological changes in a Mediterranean blue tit population. Journal of Evolutionary Biology 35 (2): 347-359. [Plateforme TE]

R Blatrix, JL Aramayo, A Zangerlé, B Roux, M Jouanne, B Anselme, Md Boisvilliers, C Krasnopolski, M Assenbaum, D McKey. (2022) Interpreting landscapes of pre-Columbian raised-field agriculture using high-resolution LiDAR topography. Journal of Archaeological Science Reports 42: 103408. [Projet exploratoire Cemeb]

F Bonhomme, L Meyer, C Arbiol, D Bănaru, L Bahri‐Sfar, K Fadhlaoui‐Zid, P Strelkov, M Arculeo, L Soulier, JP Quignard, PA Gagnaire (2022) Systematics of European coastal anchovies (genus Engraulis  Cuvier). Journal of Fish Biology 100 (2): 594-600. [Plateforme GenSeq]

 C Bonsergent, M Vittecoq, C Leray, L Burkart, KD McCoy, L Malandrin (2022) Characterization and diversity of Babesia sp. YLG, a new member of the Peircei group infecting Mediterranean yellow-legged gulls (Larus michahellis). Ticks and Tick-borne Diseases 13 (1): 101852. [Projet exploratoire Cemeb]

M Bouvy, A Bélières, C Carré, P Got, M Pagano, H Agogué, B Bec, C Roques, L Bigot, P Chabanet , C Dupuy (2022) Do microbial planktonic communities reflect the ecological changes of Glorieuses coral reefs (Iles Eparses, Western Indian Ocean)? Marine Pollution Bulletin 174: 113218. [Plateforme Microbex]

M Brondani, C Plassard, E Ramstein, A Cousson, M Hedde, L Bernard, J Trap (2022) Morpho-anatomical traits explain the effects of bacterial-feeding nematodes on soil bacterial community composition and plant growth and nutrition. Geoderma 425:  [Plateforme EcoTrop]

Q Cao, E Blondeau-Bidet, C Lorin-Nebel (2022) Intestinal osmoregulatory mechanisms differ in Mediterranean and Atlantic European sea bass: A focus on hypersalinity. Science of The Total Environment 804: 150208. [Plateforme Microbex & Plateforme q-PCR haut débit]

C Girard, AL Charruault, T Gluck, C Corradini, S Renaud (2022a) 3D models related to the publication: Deciphering the morphological variation and its ontogenetic dynamics in the Late Devonian conodont Icriodus alternatus. MorphoMuseuM Volume 08 (issue 01: 2022 ):  [Projet Exploratoire Cemeb]

C Girard, AL Charruault, T Gluck, C Corradini, S Renaud (2022b) Deciphering the morphological variation and its ontogenetic dynamics in the Late Devonian conodont Icriodus alternatus. Fossil Record  25: 25–41. [Projet exploratoire Cemeb]

E Charbonnel, C Daguin-Thiebaut, L Caradec, E Moittie, O Gilg, MV Gavrilo, H Strom, ML Mallory, RIG Morrison, HG Gilchrist, R Leblois, C Roux, JM Yearsley, G Yannic, T Broquet (2022) Searching for genetic evidence of demographic decline in an arctic seabird: beware of overlapping generations. Heredity 128 (5): 364-376. [Plateforme MBB]

S Coq, RE Cárdenas, D Mousain, M-A Selosse, F Richard, S Hättenschwiler (2022) Acquisition of nitrogen from tannin protein complexes in ectomycorrhizal pine seedlings. Pedobiologia 93-94: 150817-150817. [Plateforme PACE]

J Courboules, B Mostajir, T Trombetta, S Mas , F Vidussi (2022) Warming Disadvantages Phytoplankton and Benefits Bacteria During a Spring Bloom in the Mediterranean Thau Lagoon. Frontiers in Marine Science 9:  [Plateforme Cyto-Génomique Evolutive]

J Delmotte, C Pelletier, B Morga, R Galinier, B Petton, JB Lamy, O Kaltz, JC Avarre, M Jacquot, C Montagnani, JM Escoubas (2022) Genetic diversity and connectivity of the Ostreid herpesvirus 1 populations in France: A first attempt to phylogeographic inference for a marine mollusc disease. Virus Evolution 8 (1):  [Projet exploratoire Cemeb]

XX Deng, YF Cheng, YQ Peng, H Yu, M Proffit, F Kjellberg (2022) Overlaps in olfactive signalling coupled with geographic variation may result in localised pollinator sharing between closely related Ficus species. Bmc Ecology and Evolution 22 (1):  [Plateforme PACE]

A Desoutter, O Cases, PY Collart Dutilleul, V Simancas Escorcia, V Cannaya, F Cuisinier, R Kozyraki (2022a) Enamel and dentin in Enamel renal syndrome: A confocal Raman microscopy view. Front Physiol 13: 957110. [Plateforme Microtomographie RX]

 A Desoutter, I Panayotov, F Cuisinier, D Carayon (2022b) Human tooth enamel tuft drapes revealed by microtomography. Archives of Oral Biology 141:  [Plateforme Microtomographie RX]

A Desoutter, G Subsol, E Fargier, A Sorgius, H Tassery, M Fages, F Cuisinier (2022c) NEW METHOD TO ANALYZE RESOLUTION ACQUISITION FOR INTRAORAL SCANNERS. Metrology and Measurement Systems 29 (2): 391-404. [Plateforme Microtomographie RX]

E Djebbi, MND Yahia, E Farcy, O Pringault, D Bonnet (2022) Acute and chronic toxicity assessments of 17β-estradiol (E2) and 17α-ethinylestradiol (EE2) on the calanoid copepod Acartia clausi: Effects on survival, development, sex-ratio and reproduction. Science of The Total Environment 807: 150845. [Plateforme Microbex]

A Dotto-Maurel, C Pelletier, B Morga, M Jacquot, N Faury, L Dégremont, M Bereszczynki, J Delmotte, J-M Escoubas, G Chevignon (2022) Evaluation of tangential flow filtration coupled to long-read sequencing for ostreid herpesvirus type 1 genome assembly. Microbial Genomics 8 (11): 000895. [Plateforme Epigénonique & Plateforme GenSeq & Projet exploratoire Cemeb]

J Ducrettet, S Maurice, E Imbert (2022a) How much do we know and how much do we care about genetic diversity of threatened plants ? A case study from the French flora. Botany Letters: 1-9. [Projet partenarial Cemeb-OFB]

J Ducrettet, S Maurice, L Meslin, E Imbert (2022b) Méthodes de caractérisation génétique des populations végétales - Aide à la construction d'un protocole de renforcement. Université de Montpellier (UM), HAL Id : hal-03722321 , version 1  [Projet partenarial Cemeb-OFB]  

T Dugé de Bernonville, C Daviaud, C Chaparro, J Tost, S Maury (2022) From Methylome to Integrative Analysis of Tissue Specificity. In: V Courdavault,S Besseau (eds) Catharanthus roseus: Methods and Protocols. Springer US, New York, NY, pp 223-240 [Plateforme Epigénonique]

B Dupin, B Durand, J Cambecèdes, N Fromin (2022) Plants playing at home: Advantage of native plant seeds for ski slope revegetation in the French Pyrenees. Ecological Engineering 174: 106463. [Plateforme PACE]

A Erktan, C Roumet, F Munoz (2022) Dissecting fine root diameter distribution at the community level captures root morphological diversity. Oikos 2023 (1): e08907. [Plateforme PACE]

A Evin, L David, A Souron, B Mennecart, M Orliac, R Lebrun (2022) Size and shape of the semicircular canal of the inner ear: A new marker of pig domestication? Journal of Experimental Zoology Part B: Molecular and Developmental Evolution 338 (8): 552-560. [Plateforme Microtomographie RX]

M Fallet, C Montagnani, B Petton, L Dantan, J de Lorgeril, S Comarmond, C Chaparro, E Toulza, S Boitard, JM Escoubas, A Vergnes, J Le Grand, I Bulla, Y Gueguen, J Vidal-Dupiol, C Grunau, G Mitta, C Cosseau (2022) Early life microbial exposures shape the Crassostrea gigas immune system for lifelong and intergenerational disease protection. Microbiome 10 (1):  [Plateforme Epigénonique]

E Farcy, E Potier, N Leurs, E Gasset, G Dutto, S Lallement, C Bourdy, M Debiais-Thibaud, C Martinand-Mari (2022) Short-term effects of estradiol and bisphenol A on gene expression associated with early head mineralization in the seabass Dicentrarchus labrax. Frontiers in Marine Science:  [Plateforme MBB & Plateforme GenSeq & Projet exploratoire Cemeb]

S Ferreira-Cardoso, J Claude, A Goswami, F Delsuc, L Hautier (2022) Flexible conservatism in the skull modularity of convergently evolved myrmecophagous placental mammals. BMC Ecology and Evolution 22 (1): 87. [Plateforme Microtomographie RX]

N Fontaine, P Gauthier, G Casazza, JD Thompson (2022) Niche Variation in Endemic Lilium pomponium on a Wide Altitudinal Gradient in the Maritime Alps. Plants 11 (6): 833. [Transfert]

A Fouquet, P Peloso, R Jairam, AP Lima, AT Monico, R Ernst, PJR Kok (2022) Back from the deaf: integrative taxonomy revalidates an earless and mute species, Hylodes grandoculis van Lidth de Jeude, 1904, and confirms a new species of Pristimantis Jimenez de la Espada, 1870 (Anura: Strabomantidae) from the Eastern Guiana Shield. Organisms Diversity & Evolution 22 (4): 1065-1098. [Plateforme Microtomographie RX]

P Ganault, S Barantal, S Coq, S Hättenschwiler, S Lucas, T Decaëns, J Nahmani (2022) Leaf litter morphological traits, invertebrate body mass and phylogenetic affiliation explain the feeding and feces properties of saprophagous macroarthropods. European Journal of Soil Biology 109: 103383. [Plateforme PACE]

M Gerino, D Orange, JM Sánchez-Pérez, E Buffan-Dubau, S Canovas, B Monfort, C Albasi, S Sauvage (2022) What Inspiring Elements from Natural Services of Water Quality Regulation Could Be Applied to Water Management? Water 14 (19): 3030. [Bioinspiration]

A Gibert, F Louty, R Buscail, M Baguette, B Schatz, JAM Bertrand (2022) Extracting Quantitative Information from Images Taken in the Wild: A Case Study of Two Vicariants of the Ophrys aveyronensis Species Complex. Diversity-Basel 14 (5):  [Postdoctorat Interlabex Cemeb-Tulip]

D Grzebyk, V Pasqualini, M Garrido, Y Quilichini, C Pereto, P Cecchi (2022) Insight into the morphology and genetic diversity of the Chaetoceros tenuissimus (Bacillariophyta) species complex. European Journal of Phycology 57 (4): 507-525. [Plateforme GenSeq]

B Günther, E Jourdain, L Rubincam, R Karoliussen, SL Cox, S Arnaud Haond (2022) Feces DNA analyses track the rehabilitation of a free-ranging beluga whale. Scientific Reports 12 (1): 6412. [Plateforme GenSeq]

A Houssaye, A de Perthuis, G Houée (2022) Sesamoid bones also show functional adaptation in their microanatomy—The example of the patella in Perissodactyla. Journal of Anatomy 240 (1): 50-65. [Plateforme Microtomographie RX]

I Houssoukpèvi, Alladé, H Aholoukpè, Nonwègnon Sayimi, D Fassinou, Jorès Mauryo, M Rakotondrazafy, Nancy, G Amadji, Lucien, L Chapuis-Lardy, L Chapuis Lardy, T Chevallier (2022) Biomass and soil carbon stocks of the main land use of the Allada Plateau (Southern Benin). Carbon Management 13 (1): 249 - 265. [Plateforme EcoTrop]

M Hullot, P-O Antoine (2022) Enamel hypoplasia on rhinocerotoid teeth: Does CT-scan imaging detect the defects better than the naked eye? Palaeovertebrata 45 (1): e2. [Plateforme Microtomographie RX]

R Huys, V Poirier, MY Bourget, C Roumet, S Hättenschwiler, N Fromin, AD Munson, GT Freschet (2022) Plant litter chemistry controls coarse-textured soil carbon dynamics. Journal of Ecology 110 (12): 2911-2928. [Plateforme PACE & Plateforme TE]

L Ibanez, S Roussel (2022) The impact of nature video exposure on pro-environmental behavior: An experimental investigation. PLOS ONE 17 (11): e0275806. [Equipe de recherche junior]

H Jaonalison, J-D Durand, J Mahafina, P Valade, A Collet, F Cerqueira, D Ponton (2022) Application of DNA Barcoding for Monitoring Madagascar Fish Biodiversity in Coastal Areas. Diversity 14 (5): 377. [Plateforme GenSeq]

E Kazakou, I Bumb, E Garnier (2022) Species dominance rather than complementarity drives communitiy digestibility and litter decomposition in species-rich Mediterranean rangelands. Applied Vegetation Science:  [Plateforme PACE]

C Lacroux, E Pouydebat, M Rossignol, S Durand, A Aleeje, E Asalu, F Chandre, S Krief (2022) Repellent activity against Anopheles gambiae of the leaves of nesting trees in the Sebitoli chimpanzee community of Kibale National Park, Uganda. Malaria Journal 21 (1):  [Vectopole Sud]

J Langlois, F Guilhaumon, F Baletaud, N Casajus, CD Braga, VP Fleure, M Kulbicki, ND Loiseau, D Mouillot, J Renoult, A Stahl, RS Smith, AS Tribot, N Mouquet (2022) The aesthetic value of reef fishes is globally mismatched to their conservation priorities. Plos Biology 20 (6):  [Projet exploratoire Cemeb]

C Lasica, R de Carvalho Augusto, H Moné, G Mouahid, C Chaparro, A Veillard, A Zelisko-Schmidt, C Grunau (2022) Automated ChIPmentation procedure on limited biological material of the human blood fluke Schistosoma mansoni [version 1; peer review: 1 approved with reservations]. Wellcome Open Research 7 (133):  [Plateforme Epigénonique]

M Lasseron, T Martin, R Allain, H Haddoumi, N-E Jalil, S Zouhri, E Gheerbrant (2022) An African Radiation of ‘Dryolestoidea’ (Donodontidae, Cladotheria) and its Significance for Mammalian Evolution. Journal of Mammalian Evolution:  [Plateforme Microtomographie RX]

M Leger, L Luquot, D Roubinet (2022a) Role of mineralogical, structural and hydrodynamic rock properties in conduits formation in three distinct carbonate rock types. Chemical Geology 607:  [Plateforme Microtomographie RX]

M Leger, D Roubinet, M Jamet, L Luquot (2022b) Impact of hydro-chemical conditions on structural and hydro-mechanical properties of chalk samples during dissolution experiments. Chemical Geology 594: 120763. [Plateforme Microtomographie RX]

T Lenormand, D Roze (2022) Y recombination arrest and degeneration in the absence of sexual dimorphism. Science 375 (6581): 663-666. [Plateforme MBB]

N Leurs, C Martinand-Mari, S Marcellini, M Debiais-Thibaud (2022) Parallel Evolution of Ameloblastic scpp Genes in Bony and Cartilaginous Vertebrates. Molecular Biology and Evolution 39 (5): msac099. [Plateforme GenSeq]

N Luviano, D Duval, W Ittiprasert, J-F Allienne, Gv Tavernier, C Chaparro, C Cosseau, C Grunau (2022) Hit-and-Run Epigenetic Editing for Vectors of Snail-Borne Parasitic Diseases. Frontiers in Cell and Developmental Biology 10:  [Projet exploratoire Cemeb & Plateforme Epigenomique]

N Manincor, B Andreu, B Buatois, HL Chao, N Hautekèete, F Massol, Y Piquot, B Schatz, E Schmitt, M Dufay (2022) Geographical variation of floral scents in generalist entomophilous species with variable pollinator communities. Functional Ecology 36: 763– 778. [Plateforme PACE]

Z Mao, C Roumet, LMW Rossi, L Merino-Martı́n, J Nespoulous, O Taugourdeau, H Boukcim, S Fourtier, MD Rey-Granado, M Ramel, K Ji, J Zuo, N Fromin, A Stokes, F Fort (2022) Intra- and inter-specific variation in root mechanical traits for twelve herbaceous plants and their link with the root economics space. Oikos:  [Plateforme PACE]

D McKey, L Rodrigues, J Ruiz-Perez, R Blatrix, S Rostain (2022) Thinking Outside the Continent and Outside the Box: Cross-Continental Comparative Studies Can Enrich Studies of Pre-Columbian Raised-Field Agriculture. Journal of Ethnobiology 42 (2): 152-179. [Projet exploratoire Cemeb]

J Miquel, L Latorre, S Chamaillé-Jammes (2022) Addressing Power Issues in Biologging: An Audio/Inertial Recorder Case Study. Sensors 22 (21): 8196. [Projet exploratoire Cemeb]

AT Monico, M Ferrao, JC Chaparro, A Fouquet, AP Lima (2022) A new species of rain frog (Anura: Strabomantidae: Pristimantis) from the Guiana Shield and amended diagnosis of P. ockendeni (Boulenger, 1912). Vertebrate Zoology 72: 1035-1065. [Plateforme Microtomographie RX]

F Moullec, N Barrier, S Drira, F Guilhaumon, T Hattab, MA Peck, YJ Shin (2022) Using species distribution models only may underestimate climate change impacts on future marine biodiversity. Ecological Modelling 464:  [Projet exploratoire Cemeb]

S Mwakasungula, V Rougeron, C Arnathau, L Boundenga, E Miguel, A Boissière, D Jiolle, P Durand, A Msigwa, S Mswata, A Olotu, Y Sterkers, B Roche, G Killeen, F Cerqueira, PY Bitome-Essono, F Bretagnolle, H Masanja, C Paupy, R Sumaye, F Prugnolle (2022) Using haematophagous fly blood meals to study the diversity of blood-borne pathogens infecting wild mammals. Molecular Ecology Resources n/a (n/a):  [Plateforme GenSeq]

L Olazcuaga, J Foucaud, C Deschamps, A Loiseau, JL Claret, R Vedovato, R Guilhot, C Sevely, M Gautier, RA Hufbauer, NO Rode, A Estoup (2022) Rapid and transient evolution of local adaptation to seasonal host fruits in an invasive pest fly. Evolution Letters 6 (6): 490-505. [Chercheur invité Cemeb]

P Panklang, A Thoumazeau, R Chiarawipa, S Sdoodee, D Sebag, F Gay, P Thaler, A Brauman (2022) Rubber, rubber and rubber: How 75 years of successive rubber plantation rotations affect topsoil quality? Land Degradation & Development 33 (8): 1159-1169. [Equipe de recherche Junior & Plateforme Ecotrop]

E Paradis (2022) Probabilistic unsupervised classification for large-scale analysis of spectral imaging data. International Journal of Applied Earth Observation and Geoinformation 107: 102675. [Plateforme MBB]

T Perron, A Kouakou, C Simon, L Mareschal, G Frédéric, M Soumahoro, D Kouassi, N Rakotondrazafy, B Rapidel, J-P Laclau, A Brauman (2022) Logging residues promote rapid restoration of soil health after clear-cutting of rubber plantations at two sites with contrasting soils in Africa. Science of The Total Environment 816: 151526. [Plateforme EcoTrop]

SB Poda, B Buatois, B Lapeyre, L Dormont, A Diabaté, O Gnankiné, RK Dabiré, O Roux (2022) No evidence for long-range male sex pheromones in two malaria mosquitoes. Nature Ecology Evolution:  [Plateforme PACE]

M Richard, B Bec, L Bergeon, M Hebert, C Mablouke, F Lagarde (2022) Are mussels and oysters capable of reducing the abundances of Picochlorum sp., responsible for a massive green algae bloom in Thau lagoon, France? Journal of Experimental Marine Biology and Ecology 556:  [Plateforme Microbex]

IJ Rickard, C Vullioud, F Rousset, E Postma, S Helle, V Lummaa, R Kylli, JE Pettay, E Roskaft, GR Skjaervo, C Stormer, E Voland, D Waldvogel, A Courtiol (2022) Mothers with higher twinning propensity had lower fertility in pre-industrial Europe. Nature Communications 13 (1):  [Plateforme MBB]

D Roquis, C Cosseau, K Brener Raffalli, P Romans, P Masanet, G Mitta, C Grunau, J Vidal-Dupiol (2022) The tropical coral Pocillopora acuta displays an unusual chromatin structure and shows histone H3 clipping plasticity upon bleaching [version 2; peer review: 2 approved]. Wellcome Open Research 6 (195):  [Plateforme Epigénonique]

V Rougeron, L Boundenga, C Arnathau, P Durand, F Renaud, F Prugnolle (2022) A population genetic perspective on the origin, spread and adaptation of the human malaria agents Plasmodium falciparum and Plasmodium vivax. Fems Microbiology Reviews 46 (1):  [Projet exploratoire Cemeb]

EM Sarah-Matio, E Guillochon, SE Nsango, L Abate, CM Ngou, GA Bouopda, LB Feufack-Donfack, AN Bayibki, MT Tsapi, A Talman, A Marin-Menendez, L Ayong, A Claessens, T Lefvre, A Berry, I Morlais (2022) Genetic Diversity of Plasmodium falciparum and Distribution of Antimalarial Drug Resistance Mutations in Symptomatic and Asymptomatic Infections. Antimicrobial Agents and Chemotherapy 66 (8):  [Plateforme GenSeq]

A Shihan, S Haettenschwiler, N Fromin (2022) Root traits rather than functional diversity of soil microorganisms respond to drought and plant species composition in Mediterranean shrubland species. Frontiers in Forests and Global Change 5:  [Plateforme TE]

C Stragier, S Piry, A Loiseau, M Kane, A Sow, Y Niang, M Diallo, A Ndiaye, P Gauthier, M Borderon, L Granjon, C Brouat, K Berthier (2022) Interplay between historical and current features of the cityscape in shaping the genetic structure of the house mouse Mus musculus domesticus in Dakar (Senegal, West Africa). Peer Community Journal 2:  [Plateforme GenSeq]

E Taschen, G Callot, P Savary, M Sauve, Y Penuelas-Samaniego, F Rousset, X Parlade, MA Selosse, F Richard (2022) Efficiency of the traditional practice of traps to stimulate black truffle production, and its ecological mechanisms. Scientific Reports 12 (1): 16201. [Plateforme GenSeq]

MJ Thompson, P Capilla-Lasheras, DM Dominoni, D Réale,  A Charmantier A (2022) Phenotypic variation in urban environments: mechanisms and implications. Trends in Ecology and Evolution 37(2): 171-182:  [Chercheur invité Cemeb & Mobilité & Doctorant étranger Cemeb]

C Vernier, N Barthes, M-P Chapuis, J Foucaud, J Huguenin, N Leménager, C Piou (2022) Faeces' odours attract gregarious locust hoppers. Journal of Insect Physiology 143: 104454-104454. [Plateforme PACE]

J Vidal-Dupiol, E Harscouet, D Shefy, E Toulza, O Rey, J-F Allienne, G Mitta, B Rinkevich (2022) Frontloading of stress response genes enhances robustness to environmental change in chimeric corals. BMC Biology 20 (1): 167. [Plateforme Epigénonique]

K Villsen, E Corse, G Archambaud-Suard, K Héran, E Meglécz, AV Ereskovsky, R Chappaz, V Dubut (2022a) Diet Metabarcoding Reveals Extensive Dietary Overlap between Two Benthic Stream Fishes (Zingel asper and Cottus gobio) and Provides Insights into Their Coexistence. Diversity 14 (5): 412. [Plateforme ADN degrade]

K Villsen, E Corse, E Meglécz, G Archambaud-Suard, H Vignes, AV Ereskovsky, R Chappaz, V Dubut (2022b) DNA metabarcoding suggests adaptive seasonal variation of individual trophic traits in a critically endangered fish. Molecular Ecology 31 (22): 5889-5908. [Plateforme ADN degrade]


Publications 2021 thanks to CEMEB fundings

Exploratory projects, ERJ, doctoral and post-doct, labeled platforms and invited scientists

Akkari M, Subsol G, Zemiti N, Lavenir L, Farah C, François F, Mondain M, Captier G, Poignet P, Venail F (2021) Feasibility of cochlea high-frequency ultrasound and microcomputed tomography registration for cochlear computer-assisted surgery: a testbed. Otology & Neurotology : Official Publication of the American Otological Society, American Neurotology Society & European Academy of Otology and Neurotology 42 (6): e779–e787. [Plateforme Microtomographie RX]

Al Riachy R, Strub C, Durand N, Guibert B, Guichard H, Constancias F, Chochois V, Lopez-Lauri F, Fontana A, Schorr-Galindo S (2021) Microbiome status of cider-apples, from orchard to processing, with a special focus on Penicillium expansum occurrence and patulin contamination. Journal of Fungi 7 (4): 244. [Plateforme GenSeq & Plateforme q-PCR haut débit]

Alfieri F, Nyakatura JA, Amson E (2021) Evolution of bone cortical compactness in slow arboreal mammals. Evolution 75 (2): 542-554. [Plateforme Microtomographie RX]

Allio R, Nabholz B, Wanke S, Chomicki G, Pérez-Escobar OA, Cotton AM, Clamens A-L, Kergoat GJ, Sperling FAH, Condamine FL (2021) Genome-wide macroevolutionary signatures of key innovations in butterflies colonizing new host plants. Nature Communications 12 (1): 354. [Plateforme MBB]

Amaral MS, Santos DW, Pereira ASA, Tahira AC, Malvezzi JoVM, Miyasato PcA, Freitas RdP, Kalil J, Tjon Kon Fat EM, de Dood CJ, Corstjens PLAM, van Dam GJ, Nakano E, Castro SdO, Mattaraia VnGdM, Augusto RdC, Grunau C, Wilson RA, Verjovski-Almeida S (2021) Rhesus macaques self-curing from a schistosome infection can display complete immunity to challenge. Nature Communications 12 (1): 6181. [Plateforme Epigénomique]

Arias M, Leroy L, Madec C, Matos L, Tedore C, Elias M, Gomez D (2021) Partial wing transparency works better when disrupting wing edges: Evidence from a field experiment. Journal of Evolutionary Biology 34: 1840-1846. [Plateforme TE]

Armero A, Berthet N, Avarre J-C (2021) Intra-host diversity of SARS-Cov-2 should not be neglected: case of the State of Victoria, Australia. Viruses 13 (1): 133. [Plateforme MBB]

Augusto R, Rey O, Cosseau C, Chaparro C, Vidal-Dupiol J, Allienne J, Duval D, Pinaud S, Tˆnges S, Andriantsoa R, Luquet E, Aubret F, Dia Sow M, David P, Thomson V, Joly D, Gomes Lima M, Federico D, Danchin E, Minoda A, Grunau C (2021) A simple ATAC-seq protocol for population epigenetics. Wellcome Open Research 5: 121. [Plateforme Epigénomique]

Aupic-Samain A, Santonja M, Chomel M, Pereira S, Quer E, Lecareux C, Limousin J-M, Ourcival J-M, Simioni G, Gauquelin T, Fernandez C, Baldy V (2021) Soil biota response to experimental rainfall reduction depends on the dominant tree species in mature northern Mediterranean forests. Soil Biology and Biochemistry 154: 108122. [Plateforme PACE]

Barnagaud JY, Brockerhoff EG, Mossion R, Dufour P, Pavoine S, Deconchat M, Barbaro L, Thomassen H (2021) Trait‐habitat associations explain novel bird assemblages mixing native and alien species across New Zealand landscapes. Diversity and Distributions 28 (1): 38-52. [Projet exploratoire Cemeb]

Barry P, Broquet T, Gagnaire PA (2021) Age‐specific survivorship and fecundity shape genetic diversity in marine fishes. Evolution Letters 6 (1): 46-62. [Plateforme GenSeq]

Berio F, Broyon M, Enault S, Pirot N, López-Romero FA, Debiais-Thibaud M (2021) Diversity and evolution of mineralized skeletal tissues in Chondrichthyans. Frontiers in Ecology and Evolution 9: 223. [Plateforme Microtomographie RX]

Bettarel Y, Boudin E, Halary S, Auguet J, Péronnin J, Bouvier T, Rochelle-Newall E, Bui V, Desnues C (2021) The hungry snail, the fragile coral, and the friendly microbe. Frontiers for Young Minds 9: 573856. [Plateforme Microbex]

Bidaud A, Loizides M, Armada F, de Dios Reyes J, Carteret X, Corriol G, Consiglio G, Reumaux P, Bellanger JM (2021) Cortinarius subgenus Leprocybe in Europe: expanded Sanger and Next Generation Sequencing unveil unexpected diversity in the Mediterranean. Persoonia - Molecular Phylogeny and Evolution of Fungi 46: 188 – 215. [Plateforme GenSeq]

Blanc M, Alfonso S, Bégout M-L, Barrachina C, Hyötyläinen T, Keiter SH, Cousin X (2021) An environmentally relevant mixture of polychlorinated biphenyls (PCBs) and polybrominated diphenylethers (PBDEs) disrupts mitochondrial function, lipid metabolism and neurotransmission in the brain of exposed zebrafish and their unexposed F2 offspring. Science of The Total Environment 754: 142097. [Plateforme q-PCR haut débit]

Blanc M, Antczak P, Cousin X, Grunau C, Scherbak N, Rüegg J, Keiter S (2021) The insecticide permethrin induces transgenerational behavioral changes linked to transcriptomic and epigenetic alterations in zebrafish (Danio rerio). Science of the Total Environment 779: 146404. [Plateforme Epigénomique & Plateforme q-PCR haut débit]

Blatrix R, Kidyoo A, Kidyoo M, Piapukiew J, Satjarak A, Paliyavuth C, Boonchai W, McKey D (2021) The symbiosis between Philidris ants and the ant-plant Dischidia major includes fungal and algal associates. Symbiosis 83: 305-315. [Plateforme TE]

Bonhomme F, Meyer L, Arbiol C, Bănaru D, Bahri‐Sfar L, Fadhlaoui‐Zid K, Strelkov P, Arculeo M, Soulier L, Quignard JP, Gagnaire PA (2021) Systematics of European coastal anchovies (genus Engraulis Cuvier). Journal of Fish Biology 100 (2): 594-600. [Plateforme MBB]

Bouvy M, Dupuy C, Got P, Domaizon I, Carré C, Pagano M, Debroas D, Roques C, Leboulanger C (2021) Rapid responses of pristine marine planktonic communities in experimental approach to diuron and naphthalene (Juan de Nova Island, Western Indian Ocean). Marine and Freshwater Research 72 (7): 1065-1085. [Plateforme Microbex]

Boyer L, Jabbour‐Zahab R, Mosna M, Haag CR, Lenormand T (2021) Not so clonal asexuals: Unraveling the secret sex life of Artemia parthenogenetica. Evolution Letters 5 (2): 164-174. [Plateforme GenSeq]

Burioli EAV, Hammel M, Bierne N, Thomas F, Houssin M, Destoumieux-Garzón D, Charrière GM (2021) Traits of a mussel transmissible cancer are reminiscent of a parasitic life style. Scientific Reports 11 (1): 24110. [Plateforme q-PCR haut débit]

Caeiro-Dias G, Brelsford A, Kaliontzopoulou A, Meneses-Ribeiro M, Crochet P-A, Pinho C (2021) Variable levels of introgression between the endangered Podarcis carbonelli and highly divergent congeneric species. Heredity 126 (3): 463-476. [Projet exploratoire Cemeb]

Caizergues AE, Charmantier A, Lambrechts MM, Perret S, Demeyrier V, Lucas A, Grégoire A (2021) An avian urban morphotype: how the city environment shapes great tit morphology at different life stages. Urban Ecosystems 24: 929-941. [Plateforme TE]

Canessa R, van den Brink L, Saldana A, Rios RS, Hattenschwiler S, Mueller CW, Prater I, Tielborger K, Bader MY (2021) Relative effects of climate and litter traits on decomposition change with time, climate and trait variability. Journal of Ecology 109 (1): 447-458. [Plateforme TE]

Cao Q, Giffard-Mena I, Blondeau-Bidet E, Hermet S, Hu Y-C, Lee T-H, Lorin-Nebel C (2021) Mechanisms of acclimation to hypersalinity in two European sea bass lineages: a focus on the kidney function. Aquaculture 534: 736305. [Plateforme Microbex & Plateforme q-PCR haut débit]

Caro SP, Pierre L, Berges M, Bakker R, Doutrelant C, Bonadonna F (2021) Mutual mate preferences and assortative mating in relation to a carotenoid-based color trait in blue tits. Behavioral Ecology 32: 1171-1182. [Plateforme TE]

Cheptou P-O (2021) Pollination strategies in the face of pollinator decline. Botany Letters 168 (3): 316-323. [Projet exploratoire Cemeb]

Cheutin M-C, Villéger S, Hicks CC, Robinson JPW, Graham NAJ, Marconnet C, Restrepo CXO, Bettarel Y, Bouvier T, Auguet J-C (2021) Microbial Shift in the Enteric Bacteriome of Coral Reef Fish Following Climate-Driven Regime Shifts. Microorganisms 9 (8): 1711. [Plateforme Microbex]

Chevenet F, Fargette D, Guindon S, Bañuls A-L (2021) EvoLaps: a web interface to visualize continuous phylogeographic reconstructions. BMC Bioinformatics 22 (1): 463. [Projet exploratoire Cemeb]

Courboulès J, Vidussi F, Soulié T, Mas S, Pecqueur D, Mostajir B (2021) Effects of experimental warming on small phytoplankton, bacteria and viruses in autumn in the Mediterranean coastal Thau Lagoon. Aquatic Ecology 55 (2): 647-666. [Plateforme Microbex]

Daou L, Garnier É, Shipley B (2021) Quantifying the relationship linking the community-weighted means of plant traits and soil fertility. Ecology 102 (9): e03454. [Plateforme PACE]

Darinot F, Le Petitcorps Q, Arnal V, Coulon A, Montgelard C (2021) Effects of landscape features and flooding on the genetic structure of a small wetland rodent, the harvest mouse (Micromys minutus). Landscape Ecology 36 (6): 1755-1771. [Plateforme GenSeq]

Engel M, Vospernik S, Toigo M, Morin X, Tomao A, Trotta C, Steckel M, Barbati A, Nothdurft A, Pretzsch H, del Rio M, Skrzyszewski J, Ponette Q, Lof M, Jansons A, Brazaitis G (2021) Simulating the effects of thinning and species mixing on stands of oak (Quercus petraea (Matt.) Liebl./Quercus robur L.) and pine (Pinus sylvestris L.) across Europe. Ecological Modelling 442: 109406. [Plateforme TE]

Escalas A, Auguet J-C, Avouac A, Seguin R, Gradel A, Borrossi L, Villéger S (2021) Ecological Specialization Within a Carnivorous Fish Family Is Supported by a Herbivorous Microbiome Shaped by a Combination of Gut Traits and Specific Diet. Frontiers in Marine Science 8: 622883. [Plateforme GenSeq]

Feist R, Cornée J-J, Corradini C, Hartenfels S, Aretz M, Girard C (2021) The Devonian–Carboniferous boundary in the stratotype area (SE Montagne Noire, France). Palaeobiodiversity and Palaeoenvironments 101 (2): 295-311. [Projet exploratoire Cemeb]

Fernandez R, Moisy C (2021) Fijiyama: a registration tool for 3D multimodal time-lapse imaging. Bioinformatics 37 (10): 1482-1484. [Plateforme Microtomographie RX]

Fouquet A, Leblanc K, Framit M, Réjaud A, Rodrigues MT, Castroviejo-Fisher S, Peloso PLV, Prates I, Manzi S, Suescun U, Baroni S, Moraes LJCL, Recoder R, de Souza SM, Dal Vecchio F, Camacho A, Ghellere JM, Rojas-Runjaic FJM, Gagliardi-Urrutia G, Fabre A-C (2021) Species diversity and biogeography of an ancient frog clade from the Guiana Shield (Anura: Microhylidae: Adelastes , Otophryne , Synapturanus ) exhibiting spectacular phenotypic diversification. Biological Journal of the Linnean Society 132 (2): 233–256. [Plateforme Microtomographie RX]

Freschet GT, Pages L, Iversen CM, Comas LH, Rewald B, Roumet C, Klimesova J, Zadworny M, Poorter H, Postma JA, Adams TS, Bagniewska-Zadworna A, Bengough AG, Blancaflor EB, Brunner I, Cornelissen JHC, Garnier E, Gessler A, Hobbie SE, Meier IC, Mommer L, Picon-Cochard C, Rose L, Ryser P, Scherer-Lorenzen M, Soudzilovskaia NA, Stokes A, Sun T, Valverde-Barrantes OJ, Weemstra M, Weigelt A, Wurzburger N, York LM, Batterman SA, de Moraes MG, Janecek S, Lambers H, Salmon V, Tharayil N, McCormack ML (2021) A starting guide to root ecology: strengthening ecological concepts and standardising root classification, sampling, processing and trait measurements. New Phytologist 232: 973-1122. [Plateforme TE]

Freschet GT, Roumet C, Comas LH, Weemstra M, Bengough AG, Rewald B, Bardgett RD, De Deyn GB, Johnson D, Klimesova J, Lukac M, McCormack ML, Meier IC, Pagès L, Poorter H, Prieto I, Wurzburger N, Zadworny M, Bagniewska-Zadworna A, Blancaflor EB, Brunner I, Gessler A, Hobbie SE, Iversen CM, Mommer L, Picon-Cochard C, Postma JA, Rose L, Ryser P, Scherer-Lorenzen M, Soudzilovskaia NA, Sun T, Valverde-Barrantes OJ, Weigelt A, York LM, Stokes A (2021) Root traits as drivers of plant and ecosystem functioning: current understanding, pitfalls and future research needs. New Phytologist 232: 1123-1158. [Plateforme TE]

Gadoin E, Desnues C, Monteil-Bouchard S, Bouvier T, Auguet J-C, Roque d’Orbcastel E, Bettarel Y (2021) Fishing for the Virome of Tropical Tuna. Viruses 13 (7): 1291. [Plateforme Microbex]

García-Sánchez M, Souche M, Trives-Segura C, Plassard C (2021) The grazing activity of Acrobeloides sp. drives phytate mineralisation within its trophic relationship with bacteria. Journal of Nematology 53: 1-13. [Plateforme EcoTrop]

Garnier E, Leca E, Barkaoui K (2021) Leaf and pit traits of 35 olive varieties from different genetic groups growing in the French germplasm collection of the Porquerolles Island (Provence, France). Scientific Reports of Port-Cros national Park 35: 235–260. [Projet exploratoire Cemeb]

Gazaix A, Grillas P, Papuga G, Fontes H, Sabatier F, Pons V, Gauthier P, Thompson JD (2021) Ecological niche differentiation among six annual Lythrum species in Mediterranean temporary pools. Oecologia 197: 715–727. [Plateforme PACE & Plateforme TE]

Georgalis GL, Guinot G, Kassegne KE, Amoudji YZ, Johnson AK, Cappetta H, Hautier L (2021) 3D models related to the publication: An assemblage of giant aquatic snakes (Serpentes, Palaeophiidae) from the Eocene of Togo. MorphoMuseuM 7 (4): e154. [Plateforme Microtomographie RX]

Georgalis GL, Guinot G, Kassegne KE, Amoudji YZ, Johnson AKC, Cappetta H, Hautier L (2021) An assemblage of giant aquatic snakes (Serpentes, Palaeophiidae) from the Eocene of Togo. Swiss Journal of Palaeontology 140 (1): 20. [Plateforme Microtomographie RX]

Gervasi V, Linnell JDC, Berce T, Boitani L, Cerne R, Ciucci P, Cretois B, Derron-Hilfiker D, Duchamp C, Gastineau A, Grente O, Huber D, Iliopoulos Y, Karamanlidis AA, Kojola I, Marucco F, Mertzanis Y, Männil P, Norberg H, Pagon N, Pedrotti L, Quenette P-Y, Reljic S, Salvatori V, Talvi T, von Arx M, Gimenez O (2021) Ecological correlates of large carnivore depredation on sheep in Europe. Global Ecology and Conservation 30: e01798. [Post-doctorat Cemeb]

Gillespie LM, Hättenschwiler S, Milcu A, Wambsganss J, Shihan A, Fromin N (2021) Tree species mixing affects soil microbial functioning indirectly via root and litter traits and soil parameters in European forests. Functional Ecology 35 (10): 2190–2204. [Plateforme PACE & Plateforme TE]

Girard C, Ledevin R, Charruault A-L, Renaud S (2021) 3D models related to the publication: Patterns of bilateral asymmetry and allometry in Late Devonian Polygnathus conodonts. MorphoMuseuM 7 (2): e126. [Plateforme Microtomographie RX]

Goikoetxea A, Sadoul B, Blondeau-Bidet E, Aerts J, Blanc M-O, Parrinello H, Barrachina C, Pratlong M, Geffroy B (2021) Genetic pathways underpinning hormonal stress responses in fish exposed to short- and long-term warm ocean temperatures. Ecological Indicators 120: 106937. [Plateforme q-PCR haut débit]

Gomard Y, Flores O, Vittecoq M, Blanchon T, Toty C, Duron O, Mavingui P, Tortosa P, McCoy KD (2021) Changes in bacterial diversity, composition and interactions during the development of the seabird tick Ornithodoros maritimus (Argasidae). Microbial Ecology 81 (3): 770-783. [Projet exploratoire Cemeb]

Gomes-Tacoronte B, Absy ML, D’Apolito C, Jaramillo C, Almeida R (2021) Compositional and diversity comparisons between the palynological records of the Neogene (Solimões Formation) and Holocene sediments of Western Amazonia. Palynology 45 (1): 3-14. [Chercheur invité CeMEB]

Guerrero-Ramírez NR, Mommer L, Freschet GT, Iversen CM, McCormack ML, Kattge J, Poorter H, van der Plas F, Bergmann J, Kuyper TW, York LM, Bruelheide H, Laughlin DC, Meier IC, Roumet C, Semchenko M, Sweeney CJ, van Ruijven J, Valverde-Barrantes OJ, Aubin I, Catford JA, Manning P, Martin A, Milla R, Minden V, Pausas JG, Smith SW, Soudzilovskaia NA, Ammer C, Butterfield B, Craine J, Cornelissen JHC, de Vries FT, Isaac ME, Kramer K, König C, Lamb EG, Onipchenko VG, Peñuelas J, Reich PB, Rillig MC, Sack L, Shipley B, Tedersoo L, Valladares F, van Bodegom P, Weigelt P, Wright JP, Weigelt A (2021) Global root traits (GRooT) database. Global Ecology and Biogeography 30: 25-37. [Plateforme TE]

Guinand B, Oral M, Tougard C (2021) Brown trout phylogenetics: a persistent mirage towards (too) many species. Journal of Fish Biology 99 (2): 298-307. [Plateforme MBB]

Günther B, Fromentin J-M, Metral L, Arnaud-Haond S (2021) Metabarcoding confirms the opportunistic foraging behaviour of Atlantic bluefin tuna and reveals the importance of gelatinous prey. PeerJ 9: e11757. [Plateforme GenSeq]

Hamel R, Phanitchat T, Wichit S, Morales Vargas RE, Jaroenpool J, Diagne CT, Pompon J, Missé D (2021) New insights into the biology of the emerging Tembusu virus. Pathogens 10 (8): 1010. [Projet exploratoire Cemeb]

Hammel M, Simon A, Arbiol C, Villalba A, Burioli EAV, Pépin JF, Lamy JB, Benabdelmouna A, Bernard I, Houssin M, Charrière GM, Destoumieux‐Garzon D, Welch JJ, Metzger MJ, Bierne N (2021) Prevalence and polymorphism of a mussel transmissible cancer in Europe. Molecular Ecology 31 (3): 736-751. [Plateforme q-PCR haut débit]

Hassanaly-Goulamhoussen R, De Carvalho Augusto R, Marteu-Garello N, Péré A, Favery B, Da Rocha M, Danchin E, Abad P, Grunau C, Perfus-Barbeoch L (2021) Chromatin landscape dynamics in the early development of the plant parasitic nematode Meloidogyne incognita. Frontiers in Cell Development Biology 9: 765690. [Plateforme Epigénomique]

Hautier L, Tabuce R, Kassegne KE, Amoudji YZ, Mourlam M, Orliac M, Quillévéré F, Charruault A-L, Johnson AK, Guinot G (2021) 3D models related to the publication: New middle Eocene proboscidean from Togo illuminates the early evolution of the elephantiform-like dental pattern. MorphoMuseuM 7 (4): e145. [Plateforme Microtomographie RX]

Hautier L, Tabuce R, Mourlam MJ, Kassegne KE, Amoudji YZ, Orliac M, Quillévéré F, Charruault AL, Johnson AKC, Guinot G (2021) New Middle Eocene proboscidean from Togo illuminates the early evolution of the elephantiform-like dental pattern. Proceedings of the Royal Society B: Biological Sciences 288: 1960. [Plateforme Microtomographie RX]

Heepngoen P, Thoumazeau A, Renevier M-S, Sajjaphan K, Gay F, Brauman A (2021) Relationships between physico-chemical, biological and functional approaches for soil quality assessment. A case study along a gradient of disturbance. European Journal of Soil Biology 104: 103300. [Plateforme EcoTrop]

Hou S-L, Hättenschwiler S, Yang J-J, Sistla S, Wei H-W, Zhang Z-W, Hu Y-Y, Wang R-Z, Cui S-Y, Lü X-T, Han X-G (2021) Increasing rates of long-term nitrogen deposition consistently increased litter decomposition in a semi-arid grassland. New Phytologist 229: 296-307. [Plateforme TE]

Houssaye A, Martin F, Boisserie JR, Lihoreau F (2021) Paleoecological inferences from long bone microanatomical specializations in Hippopotamoidea (Mammalia, Artiodactyla). Journal of Mammalian Evolution 28 (3): 847–870. [Plateforme Microtomographie RX]

Ibouroi MT, Arnal V, Cheha A, Dhurham SAO, Montgelard C, Besnard A (2021) Noninvasive genetic sampling for flying foxes: a valuable method for monitoring demographic parameters. Ecosphere 12: e03327. [Plateforme ADN dégradé]

Imarazene B, Du K, Beille S, Jouanno E, Feron R, Pan Q, Torres-Paz J, Lopez-Roques C, Castinel A, Gil L, Kuchly C, Donnadieu C, Parrinello H, Journot L, Cabau C, Zahm M, Klopp C, Pavlica T, Al-Rikabi A, Liehr T, Simanovsky SA, Bohlen J, Sember A, Perez J, Veyrunes F, Mueller TD, Postlethwait JH, Schartl M, Herpin A, Rétaux S, Guiguen Y (2021) A supernumerary “B-sex” chromosome drives male sex determination in the Pachón cavefish, Astyanax mexicanus. Current Biology 31 (21): 4800-4809. [Plateforme Cytogénomique]

Jay P, Chouteau M, Whibley A, Bastide H, Parrinello H, Llaurens V, Joron M (2021) Mutation load at a mimicry supergene sheds new light on the evolution of inversion polymorphisms. Nature Genetics 53 (3): 288-293. [Plateforme MBB]

Jing X, Muys B, Bruelheide H, Desie E, Hattenschwiler S, Jactel H, Jaroszewicz B, Kardol P, Ratcliffe S, Scherer-Lorenzen M, Selvi F, Vancampenhout K, van der Plas F, Verheyen K, Vesterdal L, Zuo J, Van Meerbeek K (2021) Above- and below-ground complementarity rather than selection drive tree diversity-productivity relationships in European forests. Functional Ecology 35: 1756-1767. [Plateforme TE]

Joimel S, Cortet J, Consalès JN, Branchu P, Haudin C-S, Morel JL, Schwartz C (2021) Contribution of chemical inputs on the trace elements concentrations of surface soils in urban allotment gardens. Journal of Soils and Sediments 21: 328-337. [Plateforme TE]

Joimel S, Schwartz C, Bonfanti J, Hedde M, Krogh PH, Peres G, Pernin C, Rakoto A, Salmon S, Santorufo L, Cortet J (2021) Functional and taxonomic diversity of Collembola as complementary tools to assess land use effects on soils biodiversity. Frontiers in Ecology and Evolution 9: 630919. [Plateforme TE]

Jourdan M, Hättenschwiler S (2021) Decomposition in mixed beech forests in the south-western Alps under severe summer drought. Ecosystems 24 (8): 2061-2078. [Plateforme TE]

Jourdan M, Piedallu C, Baudry J, Defossez E, Morin X (2021) Tree diversity and the temporal stability of mountain forest productivity: testing the effect of species composition, through asynchrony and overyielding. European Journal of Forest Research 140 (2): 273-286. [Plateforme TE]

Kassegne KE, Mourlam M, Guinot G, Amoudji YZ, Martin JE, Togbe KA, Johnson AK, Hautier L (2021) 3D models related to the publication: First partial cranium of Togocetus from Kpogamé (Togo) and the protocetid diversity in the Togolese phosphate basin. MorphoMuseuM 7 (2): e143. [Plateforme Microtomographie RX]

Kassegne KE, Mourlam MJ, Guinot G, Amoudji YZ, Martin JE, Togbe KA, Johnson AK, Hautier L (2021) First partial cranium of Togocetus from Kpogamé (Togo) and the protocetid diversity in the Togolese phosphate basin. Annales de Paleontologie 107 (2): 102488. [Plateforme Microtomographie RX]

Kidyoo A, Kidyoo M, Blatrix R, Deconninck G, McKey D, Ekkaphan P, Proffit M (2021) Molecular phylogenetic analysis and taxonomic reconsideration of Ceropegia hirsuta (Apocynaceae, Asclepiadoideae) reveal a novelty in Thailand, Ceropegia citrina sp. nov., with notes on its pollination ecology. Plant Systematics and Evolution 307 (2): 14. [Plateforme PACE]

Krick MV, Desmarais E, Samaras A, Guéret E, Dimitroglou A, Pavlidis M, Tsigenopoulos C, Guinand B (2021) Family-effects in the epigenomic response of red blood cells to a challenge test in the European sea bass (Dicentrarchus labrax, L.). BMC Genomics 22 (1): 111. [Plateforme MBB]

Kulagowski R, Thoumazeau A, Leopold A, Lienhard P, Boulakia S, Metay A, Sturm T, Tixier P, Brauman A, Fogliani B, Tivet F (2021) Effects of conservation agriculture maize-based cropping systems on soil health and crop performance in New Caledonia. Soil and Tillage Research 212: 105079. [Plateforme EcoTrop]

L'Honoré T, Lorin-Nebel C, Blondeau-Bidet E, Perez J, Veyrunes F, Farcy E (2021) Intraspecific variation in freshwater tolerance has consequences for telomere dynamics in the euryhaline teleost Dicentrarchus labrax. Journal of Experimental Marine Biology and Ecology 545: 151611. [Plateforme Cytogénomique & Plateforme q-PCR haut débit & Projet Equipe de Recherche Junior Cemeb & Projet exploratoire Cemeb]

Latorre L, Chamaille-Jammes S (2021) Low-power embedded audio recording using MEMS microphones. Proceedings of the 2020 Symposium on Design, Test, Integration & Packaging of MEMS and MOEMS: doi:10.1109/DTIP51112.2020.9139147. [Projet partenarial Cemeb]

Le Roncé I, Gavinet J, Ourcival JM, Mouillot F, Chuine I, Limousin JM (2021) Holm oak fecundity does not acclimate to a drier world. New Phytologist 231 (2): 631-645. [Projet Equipe de Recherche Junior Cemeb & Plateforme TE]

le Verger K, González Ruiz LR, Billet G (2021) Comparative anatomy and phylogenetic contribution of intracranial osseous canals and cavities in armadillos and glyptodonts (Xenarthra, Cingulata). Journal of Anatomy 239 (6): 1473–1502. [Plateforme Microtomographie RX]

Lebrun R, Perier A, Masters J, Marivaux L, Couette S (2021) Lower levels of vestibular developmental stability in slow-moving than fast-moving primates. Symmetry 13 (12): 2305. [Plateforme Microtomographie RX]

Ledoux JB, Ghanem R, Horaud M, López‐Sendino P, Romero‐Soriano V, Antunes A, Bensoussan N, Gómez‐Gras D, Linares C, Machordom A, Ocaña O, Templado J, Leblois R, Ben Souissi J, Garrabou J, Yeo D (2021) Gradients of genetic diversity and differentiation across the distribution range of a Mediterranean coral: Patterns, processes and conservation implications. Diversity and Distributions 27 (11): 2104-2123. [Projet exploratoire Cemeb & Plateforme MBB]

Leger M, Luquot L (2021) Importance of microstructure in carbonate rocks: laboratory and 3D-imaging petrophysical characterization. Applied Sciences 11 (9): 3784. [Plateforme Microtomographie RX]

Leroy T, Rousselle M, Tilak M-K, Caizergues AE, Scornavacca C, Recuerda M, Fuchs J, Illera JC, De Swardt DH, Blanco G, Thébaud C, Milá B, Nabholz B (2021) Island songbirds as windows into evolution in small populations. Current Biology 31 (6): 1303-1310.e4. [Plateforme MBB]

Leruste A, Garrido M, Malet N, Bec B, De Wit R, Cecchi P, Pasqualini V (2021) Impact of nutrient availability on the trophic strategies of the planktonic protist communities in a disturbed Mediterranean coastal lagoon. Hydrobiologia 848 (5): 1101-1119. [Plateforme Microbex]

Leurs N, Martinand-Mari C, Ventéo S, Haitina T, Debiais-Thibaud M (2021) Evolution of Matrix Gla and Bone Gla Protein Genes in Jawed Vertebrates. Frontiers in Genetics 12: 620659. [Plateforme GenSeq & Plateforme MBB]

Lihoreau F, Sarr R, Chardon D, Boisserie J-R, Lebrun R, Adnet S, Martin JE, Sambou B, Tabuce R, Thiam M, Hautier L (2021) 3D model related to the publication: A fossil terrestrial fauna from Tobène (Senegal) provides a unique early Pliocene window in western Africa. MorphoMuseuM 7 (3): e102. [Plateforme Microtomographie RX]

Lihoreau F, Sarr R, Chardon D, Boisserie JR, Lebrun R, Adnet S, Martin JE, Pallas L, Sambou B, Tabuce R, Thiam MM, Hautier L (2021) A fossil terrestrial fauna from Tobène (Senegal) provides a unique early Pliocene window in western Africa. Gondwana Research 99: 21–35. [Plateforme Microtomographie RX]

Loisier A, Savelli M-P, Arnal V, Claro F, Gambaiani D, Sénégas JB, Cesarini C, Sacchi J, Miaud C, Montgelard C (2021) Genetic composition, origin and conservation of loggerhead sea turtles (Caretta caretta) frequenting the French Mediterranean coasts. Marine Biology 168 (4): 52. [Plateforme GenSeq]

Luviano N, Lopez M, Gawehns F, Chaparro C, Arimondo PB, Ivanovic S, David P, Verhoeven K, Cosseau C, Grunau C (2021) The methylome of Biomphalaria glabrata and other mollusks: enduring modification of epigenetic landscape and phenotypic traits by a new DNA methylation inhibitor. Epigenetics & Chromatin 14 (1): 48. [Projet exploratoire Cemeb & Mobilité Cemeb]

Marques R, Rufino M, Darnaude AM, Carcaillet F, Meffre M, Bonnet D (2021) Jellyfish degradation in a shallow coastal Mediterranean lagoon. Estuarine, Coastal and Shelf Science 261: 107527. [Plateforme Microbex]

McKey D (2021) Making the most of grasslands and heathlands : unearthing the links between soil paring-and-burning, plaggen cultivation, and raised-field agriculture. Revue d’Ethnoécologie 20 (2021): 8120. [Projet exploratoire Cemeb]

Mondet F, Blanchard S, Barthes N, Beslay D, Bordier C, Costagliola G, Hervé MR, Lapeyre B, Kim SH, Basso B, Mercer AR, Conte YL (2021) Chemical detection triggers honey bee defense against a destructive parasitic threat. Nature Chemical Biology 17 (5): 524–530. [Plateforme PACE]

Odjo T, Diagne D, Adreit H, Milazzo J, Raveloson H, Andriantsimialona D, Kassankogno AI, Ravel S, Gumedzoé YMD, Ouedraogo I, Koita O, Silué D, Tharreau D (2021) Structure of African populations of Pyricularia oryzae from rice. Phytopathology 111 (8): 1428-1437. [Plateforme GenSeq]

Olazcuaga L, Foucaud J, Gautier M, Deschamps C, Loiseau A, Leménager N, Facon B, Ravigné V, Hufbauer RA, Estoup A, Rode NO (2021) Adaptation and correlated fitness responses over two time scales in Drosophila suzukii populations evolving in different environments. Journal of Evolutionary Biology 34 (8): 1225-1240. [Post-doctorat Cemeb & Chercheur invité CeMEB & Mobilité]

Orliac M, Bouaziz H, Weppe R (2021) Brain damage: the endocranial cast of Mixtotherium cuspidatum (Mammalia, Artiodactyla) from the Victor Brun Museum (Montauban, France). MorphoMuseuM 7 (4): e158. [Plateforme Microtomographie RX]

Orliac M, Thewissen JGM (2021) 3D models related to the publication: The endocranial cast of Indohyus (Artiodactyla, Raoellidae): the origin of the cetacean brain. MorphoMuseuM 7 (2): e137. [Plateforme Microtomographie RX]

Paradis E (2021) Forest gains and losses in Southeast Asia over 27 years: The slow convergence towards reforestation. Forest Policy and Economics 122: 102332. [Plateforme MBB]

Pordel A, Ravel S, Charriat F, Gladieux P, Cros-Arteil S, Milazzo J, Adreit H, Javan-Nikkhah M, Mirzadi-Gohari A, Moumeni A, Tharreau D (2021) Tracing the origin and evolutionary history of Pyricularia oryzae infecting maize and barnyard grass. Phytopathology 111 (1): 128-136. [Plateforme GenSeq]

Quéméré E, Aucourd M, Troispoux V, Brosse S, Murienne J, Covain R, Le Bail PY, Olivier J, Tysklind N, Galan M (2021) Unraveling the dietary diversity of Neotropical top predators using scat DNA metabarcoding: A case study on the elusive Giant Otter. Environmental DNA 3 (5): 889-900. [Plateforme GenSeq]

Rabier C-E, Berry V, Stoltz M, Santos JD, Wang W, Glaszmann J-C, Pardi F, Scornavacca C (2021) On the inference of complex phylogenetic networks by Markov Chain Monte-Carlo. PLOS Computational Biology 17 (9): e1008380. [Plateforme MBB]

Rain‐Franco A, Mouquet N, Gougat‐Barbera C, Bouvier T, Beier S (2021) Niche breadth affects bacterial transcription patterns along a salinity gradient. Molecular Ecology 31 (4): 1216-1233. [Plateforme Microbex]

Renaud S, Ecalle B, Claisse P, Charruault AL, Ledevin R, Girard C, Lautenschlager S (2021) Patterns of bilateral asymmetry and allometry in Late Devonian Polygnathus conodonts. Palaeontology 64 (1): 137-159. [Projet exploratoire Cemeb]

Rounsevell MDA, Arneth A, Brown C, Cheung WWL, Gimenez O, Holman I, Leadley P, Luján C, Mahevas S, Maréchaux I, Pélissier R, Verburg PH, Vieilledent G, Wintle BA, Shin Y-J (2021) Identifying uncertainties in scenarios and models of socio-ecological systems in support of decision-making. One Earth 4 (7): 967-985. [Projet exploratoire Cemeb]

Roy L, Giangaspero A, Sleeckx N, Øines Ø (2021) Who Is Dermanyssus gallinae? Genetic structure of populations and critical synthesis of the current knowledge. Frontiers in Veterinary Science 8: 650546. [Plateforme TE]

Salazar Zarzosa P, Diaz Herraiz A, Olmo M, Ruiz-Benito P, Barrón V, Bastias CC, de la Riva EG, Villar R (2021) Linking functional traits with tree growth and forest productivity in Quercus ilex forests along a climatic gradient. Science of The Total Environment 786: 147468. [Plateforme TE]

Segrestin J, Sartori K, Navas ML, Kattge J, Díaz S, Garnier E (2021) PhenoSpace: A Shiny application to visualize trait data in the phenotypic space of the global spectrum of plant form and function. Ecology and Evolution 11 (4): 1526-1534. [Plateforme TE]

Sicard M, Namias A, Perriat-Sanguinet M, Carron E, Unal S, Altinli M, Landmann F, Weill M, Lemaitre B (2021) Cytoplasmic incompatibility variations in relation with Wolbachia cid  genes divergence in Culex pipiens. mBio 12 (1): e02797-20. [Plateforme GenSeq]

Simon A, Fraïsse C, El Ayari T, Liautard‐Haag C, Strelkov P, Welch JJ, Bierne N (2021) How do species barriers decay? Concordance and local introgression in mosaic hybrid zones of mussels. Journal of Evolutionary Biology 34 (1): 208-223. [Plateforme GenSeq & Plateforme MBB]

Soulié A-S, Sleeckx N, Roy L (2021) Repellent properties of natural substances against Dermanyssus gallinae: review of knowledge and prospects for Integrated Pest Management. Acarologia 61 (1): 3-19. [Plateforme TE]

Sow MD, Le Gac AL, Fichot R, Lanciano S, Delaunay A, Le Jan I, Lesage‐Descauses MC, Citerne S, Caius J, Brunaud V, Soubigou‐Taconnat L, Cochard H, Segura V, Chaparro C, Grunau C, Daviaud C, Tost J, Brignolas F, Strauss SH, Mirouze M, Maury S (2021) RNAi suppression of DNA methylation affects the drought stress response and genome integrity in transgenic poplar. New Phytologist 232: 80–97. [Plateforme Epigénomique]

Stradic SL, Roumet C, Durigan G, Cancian L, Fidelis A (2021) Variation in biomass allocation and root functional parameters in response to fire history in Brazilian savannas. Journal of Ecology 109 (12): 4143–4157. [Plateforme PACE]

Terral J-F, Bonhomme V, Pagnoux C, Ivorra S, Newton C, Paradis L, Ater M, Kassout J, Limier B, Bouby L, Cornet F, Barazani O, Dag A, Galili E (2021) The shape diversity of olive stones resulting from domestication and diversification unveils traits of the oldest known 6500-years-old table olives from Hishuley Carmel site (israel). Agronomy 11 (11): 2187. [Projet exploratoire Cemeb]

Tougard C, Vukić J, Ahnelt H, Buj I, Kovačić M, Moro GA, Tutman P, Šanda R (2021) Quaternary climatic cycles promoted (re)colonization and diversification events in Adriatic sand gobies. Journal of Zoological Systematics and Evolutionary Research 59 (5): 1037-1052. [Plateforme GenSeq]

Tournayre O, Leuchtmann M, Galan M, Trillat M, Piry S, Pinaud D, Filippi-Codaccioni O, Pontier D, Charbonnel N (2021) Au menu du Grand rhinolophe dans l’Ouest de la France : un plat principal et des accompagnements au gré des paysages, de ses besoins énergétiques et de la phénologie des proies. Plumes de Naturalistes 5: 39-60. [Doctorat Cemeb]

Tournayre O, Leuchtmann M, Galan M, Trillat M, Piry S, Pinaud D, Filippi‐Codaccioni O, Pontier D, Charbonnel N (2021) eDNA metabarcoding reveals a core and secondary diets of the greater horseshoe bat with strong spatio‐temporal plasticity. Environmental DNA 3 (1): 277-296. [Doctorat Cemeb & Projet Equipe de Recherche Junior Cemeb & Plateforme GenSeq]

Trap J, Ranoarisoa PM, Irshad U, Plassard C (2021) Richness of rhizosphere organisms affects plant P nutrition according to P source and mobility. Agriculture 11 (2): 157. [Plateforme EcoTrop]

Trombetta T, Vidussi F, Roques C, Mas S, Scotti M, Mostajir B (2021) Co-occurrence networks reveal the central role of temperature in structuring the plankton community of the Thau Lagoon. Scientific Reports 11 (1): 17675 [Plateforme Microbex]

Valencia‐Montoya WA, Flaven E, Pouzadoux J, Imbert E, Cheptou PO (2021) Rapid divergent evolution of an annual plant across a latitudinal gradient revealed by seed resurrection. Evolution 75 (11): 2759-2772. [Plateforme GenSeq & Projet exploratoire Cemeb & Plateforme TE]

Vanderplanck M, Lapeyre Bt, Brondani M, Opsommer M, Dufay M, Hossaert-McKey M, Proffit M (2021) Ozone Pollution Alters Olfaction and Behavior of Pollinators. Antioxidants 10 (5): 636. [Plateforme PACE]

Virgoulay T, Rousset F, Noûs C, Leblois R (2021) GSpace: an exact coalescence simulator of recombining genomes under isolation by distance. Bioinformatics 37 (20): 3673-3675. [Projet exploratoire Cemeb & Plateforme MBB]

Vulin J, Murri S, Madrières S, Galan M, Tatard C, Piry S, Vaccari G, D’Agostino C, Charbonnel N, Castel G, Marianneau P (2021) Isolation and genetic characterization of Puumala Orthohantavirus strains from France. Pathogens 10 (3): 349. [Plateforme GenSeq]

Wambsganss J, Beyer F, Freschet GT, Scherer-Lorenzen M, Bauhus J (2021) Tree species mixing reduces biomass but increases length of absorptive fine roots in European forests. Journal of Ecology 109 (7): 2678–2691. [Plateforme PACE]

Zheng HF, Chen YM, Liu Y, Hedenec P, Peng Y, Xu ZF, Tan B, Zhang L, Guo L, Wang LF, Vesterdal L (2021) Effects of litter quality diminish and effects of vegetation type develop during litter decomposition of two shrub species in an alpine treeline ecotone. Ecosystems 24 (1): 197-210. [Plateforme TE]

Zheng Y, Hu Z, Pan X, Chen X, Derrien D, Hu F, Liu M, Hättenschwiler S (2021) Carbon and nitrogen transfer from litter to soil is higher in slow than rapid decomposing plant litter: A synthesis of stable isotope studies. Soil Biology and Biochemistry 156: 108196. [Plateforme TE]

Zriki G, Blatrix R, Bicout DJ, Gimenez O, Soulié A-S, Dadu L, Degueldre D, Chiron G, Sleeckx N, Roy L (2021) Population-level impact of native arthropod predators on the poultry red mite Dermanyssus gallinae. Journal of Experimental Zoology Part A: Ecological and Integrative Physiology 335 (6): 552-563. [Doctorat Cemeb & Plateforme TE]

Zriki G, Blatrix R, Dadu L, Soulié A-S, Dijoux J, Degueldre D, Sleeckx N, Roy L (2021) No deleterious effect of inundative releases of biological agents on native arthropod assemblages in poultry farms: A mesocosm experiment. Biological Control 156: 104560. [Doctorat Cemeb & Plateforme TE]


Publications 2020 thanks to CEMEB fundings

Exploratory projects, ERJ, doctoral and post-doct, labeled platforms and invited scientists

Aguilera O, Araújo OMOd, Hendy A, Nogueira AAE, Nogueira ACR, Maurity CW, Kutter VT, Martins MA, Coletti G, Dias BB, Silva-Caminha SAF, Bencomo K, Lopes RT, Jaramillo C (2020) Palaeontological framework from Pirabas Formation (North  Brazil) used as potential model for equatorial carbonate platform. Marine Micropaleontology 154: 101813. [Chercheur invité CeMEB]

Allio R, Schomaker-Bastos A, Romiguier J, Prosdocimi F, Nabholz B, Delsuc F (2020a) MitoFinder: Efficient automated large-scale extraction of mitogenomic data in target enrichment phylogenomics. Molecular Ecology Resources 20 (4): 892-905. [Plateforme MBB]

Allio R, Scornavacca C, Nabholz B, Clamens AL, Sperling FA, Condamine FL (2020b) Whole genome shotgun phylogenomics resolves the pattern and timing of swallowtail butterfly evolution. Systematic Biology 69 (1): 38-60. [Plateforme MBB]

Alonso P, Blondin L, Gladieux P, Mahe F, Sanguin H, Ferdinand R, Filloux D, Desmarais E, Cerqueira F, Jin BH, Huang HC, He XH, Morel JB, Martin DP, Roumagnac P, Verniere C (2020) Heterogeneity of the rice microbial community of the Chinese centuries-old Honghe Hani rice terraces system. Environmental Microbiology 22 (8): 3429-3445. [Plateforme GenSeq]

Altinli M, Lequime S, Atyame C, Justy F, Weill M, Sicard M (2020) Wolbachia modulates prevalence and viral load of Culex pipiens densoviruses in natural populations. Molecular Ecology 29 (20): 4000-4013. [Plateforme GenSeq]

Angell CS, Oudin MJ, Rode NO, Mautz BS, Bonduriansky R, Rundle HD (2020) Development time mediates the effect of larval diet on ageing and mating success of male antler flies in the wild. Proceedings of the Royal Society B: Biological Sciences 287 (1938): 20201876. [Post-doctorat Cemeb]

Assemat A, Mourlam M, Orliac MJ (2020) 3D models related to the publication: The  ossicular chain of Cainotheriidae (Mammalia, Artiodactyla). MorphoMuseuM 6: e110. [Plateforme Microtomographie RX]

Assogba BS, Pasteur N, Makoundou P, Unal S, Baba-Moussa L, Labbe P, Weill M (2020) Dynamic of resistance alleles of two major insecticide targets in Anopheles gambiae (s.l.) populations from Benin, West Africa. Parasites & Vectors 13 (1): 134. [Plateforme GenSeq]

Bas C, Imbert I, Clermont S, Reinert ME, Calvet C, Berté C, Vaissière A-C (2020) Approches anticipées et planifiées de la compensation écologique en Allemagne : vers un retour d'expérience pour la France ? Sciences, Eaux & Territoires 31: 44-48. [Post-doctorat Cemeb]

Battie-Laclau P, Taschen E, Plassard C, Dezette D, Abadie J, Arnal D, Benezech P, Duthoit M, Pablo AL, Jourdan C, Laclau JP, Bertrand I, Taudiere A, Hinsinger P (2020) Role of trees and herbaceous vegetation beneath trees in maintaining arbuscular mycorrhizal communities in temperate alley cropping systems. Plant and Soil 453 (1- 2): 153-171. [Plateforme TE]

Berio F, Evin A, Goudemand N, Debiais‐Thibaud M (2020) The intraspecific diversity of tooth morphology in the large‐spotted catshark Scyliorhinus stellaris: insights into the ontogenetic cues driving sexual dimorphism. Journal of Anatomy 237: 960-978. [Plateforme Microtomographie RX]

Besnard G, Cheptou P-O, Debbaoui M, Lafont P, Hugueny B, Dupin J, BaaliCherif D (2020) Paternity tests support a di-allelic self-incompatibility system in a wild olive (Oleaeuropaea subsp. laperrinei, Oleaceae). Ecology and Evolution 10 (4): 1876-1888. [Plateforme TE]

Binetruy F, Buysse M, Lejarre Q, Barosi R, Villa M, Rahola N, Paupy C, Ayala D, Duron O (2020a) Microbial community structure reveals instability of nutritional symbiosis during the evolutionary radiation of Amblyomma ticks. Molecular Ecology 29 (5): 1016-1029. [Plateforme GenSeq]

Binetruy F, Garnier S, Boulanger N, Talagrand-Reboul E, Loire E, Faivre B, Noel V, Buysse M, Duron O (2020b) A novel Borrelia species, intermediate between Lyme disease and relapsing fever groups, in neotropical passerine-associated ticks. Scientific  Reports 10 (1): 10596. [Plateforme GenSeq]

Brauman A, Thoumazeau A (2020) Biofunctool (R) : un outil de terrain pour évaluer la santé des sols, basé sur la mesure de fonctions issues de l'activité des organismes du sol. Etude et Gestion des sols 27 (1): 289-303. [Plateforme EcoTrop]

Bsaibes S, Piel F, Gros V, Truong F, Lafouge F, Ciuraru R, Buysse P, Kammer J, Loubet B, Staudt M (2020) Monoterpene chemical speciation with high time resolution using a FastGC/PTR-MS: Results from the COV3ER experiment on Quercus ilexAtmosphere 11 (7): 690. [Plateforme TE]

Burban C, Rocha S, Leblois R, Rossi J-P, Sauné L, Branco M, Kerdelhué C (2020) From sympatry to parapatry: a rapid change in the spatial context of incipient allochronic speciation. Evolutionary Ecology 34 (1): 101-121. [Plateforme GenSeq]

Calvet C, Delbar V, Chapron P, Brasebin M, Perret J, Moulherat S (2020) La biodiversité à l'épreuve des choix d'aménagement : une approche par la modélisation appliquée à la région Occitanie. Sciences, Eaux & Territoires 31: 24-31. [Post-doctorat Cemeb]

Chambert T, Imberdis L, Couloumy C, Bonet R, Besnard A (2020) Density dependence in Golden Eagle Aquila chrysaetos fecundity better explained by individual adjustment than territory heterogeneity. Ibis 162 (4): 1312-1323. [Post-doctorat Cemeb]

Champreux A, Meyer-Berthaud B, Decombeix A-L (2020) Keraphyton gen. nov., a new Late Devonian fern-like plant from Australia. PeerJ 8: e9321. [Projet exploratoire Cemeb]

Coq S, Nahmani J, Kazakou E, Fromin N, David J-F (2020) Do litter-feeding  macroarthropods disrupt cascading effects of land use on microbial decomposer activity? Basic and Applied Ecology 46: 24-34. [Plateforme TE & Plateforme PACE]

D’Hervilly C, Marsden C, Hedde M, Bertrand I (2020) Sown understory vegetation strips impact soil chemical fertility, associated microorganisms and macro-invertebrates in two temperate alley cropping systems. Agroforestry Systems 94 (5): 1851-1864. [Plateforme EcoTrop]

Daussy J, Staudt M (2020) Do future climate conditions change volatile organic compound emissions from Artemisia annua? Elevated CO2 and temperature modulate actual VOC emission rate but not its emission capacity. Atmospheric Environment: X 7: 100082. [Plateforme TE & Plateforme PACE]

de Carvalho Augusto R, Roquis D, Al Picard M, Chaparro C, Cosseau C, Grunau C (2020) Measuring histone modifications in the human parasite Schistosoma mansoniMethods in Molecular Biology 2151: 93-107. [Plateforme Epigénomique]

Derolez V, Malet N, Fiandrino A, Lagarde F, Richard M, Ouisse V, Bec B, Aliaume C (2020) Fifty years of ecological changes: Regime shifts and drivers in a coastal  Mediterranean lagoon during oligotrophication. Science of The Total Environment 732: 139292. [Plateforme Microbex]

Desriac F, El Harras A, Simon M, Bondon A, Brillet B, Le Chevalier P, Pugnière M, Got P, Destoumieux-Garzón D, Fleury Y (2020) Alterins produced by oyster-associated Pseudoalteromonas are antibacterial cyclolipopeptides with LPS-binding activity. Marine Drugs 18 (12): 630. [Plateforme Microbex]

Dormont L, Fort T, Bessière J-M, Proffit M, Garcia Hidalgo E, Buatois B, Schatz B (2020) Sources of floral scent variation in the food-deceptive orchid Orchis mascula. Acta Oecologica 107: 103600. [Plateforme PACE]

Draredja MA, Frihi H, Boualleg C, Abadie E, Laabir M (2020) Distribution of dinoflagellate cyst assemblages in recent sediments from a southern Mediterranean lagoon (Mellah, Algeria) with emphasis on toxic species. Environmental Science and Pollution Research 27 (20): 25173-25185. [Plateforme Microbex]

Dugé de Bernonville T, Maury Sp, Delaunay A, Daviaud C, Chaparro C, Tost Jr, O‚ÄôConnor SE, Courdavault V (2020) Developmental Methylome of the Medicinal Plant Catharanthus roseus Unravels the Tissue-Specific Control of the Monoterpene Indole Alkaloid Pathway by DNA Methylation. International Journal of Molecular Sciences 21 (17): 6028. [Plateforme Epigénomique]

El Adouzi M, Arriaga-Jiménez A, Dormont L, Barthes N, Labalette A, Lapeyre Bt, Bonato O, Roy L (2020) Modulation of feed composition is able to make hens less attractive to the poultry red mite Dermanyssus gallinae. Parasitology 147 (2): 171-181. [Plateforme PACE]

Evin A, Lebrun R, Durocher M, Ameen C, Larson G, Sykes N (2020) Building three- dimensional models before destructive sampling of bioarchaeological remains: A comment to Pálsdóttir et al. (2019). Royal Society Open Science 7: [Plateforme Microtomographie RX]

Ferreira MS, Alves PC, Callahan CM, Giska I, Farelo L, Jenny H, Mills LS, Hackländer K, Good JM, Melo‐Ferreira J (2020) Transcriptomic regulation of seasonal coat color change in hares. Ecology and Evolution 10 (3): 1180-1192. [Plateforme MBB]

Ferreira-Cardoso S, Billet G, Gaubert P, Delsuc F, Hautier L (2020a) Skull shape variation in extant pangolins (Pholidota: Manidae): allometric patterns and  systematic implications. Zoological Journal of the Linnean Society 188 (1): 255-275. [Plateforme Microtomographie RX]

Ferreira-Cardoso S, Fabre P-H, de Thoisy B, Delsuc F, Hautier L (2020b) 3D models related to the publication: "Comparative masticatory myology in anteaters and its implications for interpreting morphological convergence in myrmecophagous placentals". MorphoMuseuM 6: e114. [Plateforme Microtomographie RX]

Ferreira-Cardoso S, Fabre PH, de Thoisy B, Delsuc F, Hautier L (2020c) Comparative masticatory myology in anteaters and its implications for interpreting morphological convergence in myrmecophagous placentals. PeerJ 8: e9690. [Plateforme Microtomographie RX]

Fietz K, Trofimenko E, Guerin P-E, Arnal V, Torres-Oliva M, Lobréaux S, Pérez-Ruzafa A, Manel S, Puebla O (2020) New genomic resources for three exploited Mediterranean fishes. Genomics 112 (6): 4297-4303. [Plateforme MBB]

Fort F, Freschet GT (2020) Plant ecological indicator values as predictors of fine-root trait variations. Journal of Ecology 108: 1565-1577. [Plateforme TE]

Fromin N, Shihan A, Santonja M, Baldy V, Hättenschwiler S (2020) Soil microbial activity in a Mediterranean garrigue responds more to changing shrub community than to  reduced rainfall. Plant and Soil 449: 405-421. [Plateforme TE & Plateforme PACE]

Galès A, Triplet S, Geoffroy T, Roques C, Carré C, Le Floc’h E, Lanfranchi M, Simier M, Roque d’Orbcastel E, Przybyla C, Fouilland E (2020) Control of the pH for marine microalgae polycultures: A key point for CO2 fixation improvement in intensive cultures. Journal of CO2 Utilization 38: 187-193. [Plateforme Microbex]

Gamble A, Garnier R, Chambert T, Gimenez O, Boulinier T (2020) Next-generation serology: integrating cross-sectional and capture-recapture approaches to infer disease  dynamics. Ecology 101 (2): e02923. [Post-doctorat Cemeb]

Ganem G, Dufour CMS, Avenant NL, Caminade P, Eiseb SJ, Tougard C, Pillay N (2020) An update on the distribution and diversification of Rhabdomys sp. (Muridae, Rodentia). Journal of Vertebrate Biology 69 (2): 20013.1-17. [Projet exploratoire Cemeb & Plateforme GenSeq & Plateforme MBB]

García de Jalón L, Limousin J-M, Richard F, Gessler A, Peter M, Hättenschwiler S, Milcu A (2020) Microhabitat and ectomycorrhizal effects on the establishment, growth and survival of Quercus ilex L. seedlings under drought. Plos One 15 (6): e0229807. [Plateforme TE]

Gavinet J, Ourcival JM, Gauzere J, García de Jalón L, Limousin JM (2020) Drought mitigation by thinning: Benefits from the stem to the stand along 15 years of experimental rainfall exclusion in a holm oak coppice. Forest Ecology and Management 473: 118266. [Plateforme TE]

Gazaix A, Klesczewski M, Bouchet MA, Cartereau M, Molina J, Michaud H, Muller SD, Pirsoul L, Gauthier P, Grillas P, Thompson JD (2020a) A history of discoveries and disappearances of the rare annual plant Lythrum thesioides M.Bieb.: new insights into its ecology and biology. Botany Letters 167: 201-211. [Plateforme TE]

Gazaix A, Mazarc S, Veredd S (2020b) Lythrum netofa (Lythraceae) a new species from a temporary flooded plain of Israel. Phytotaxa 437: 47-50. [Plateforme TE]

Gil-Fernández A, Saunders PA, Martín-Ruiz M, Ribagorda M, López-Jiménez P, Jeffries DL, Parra MT, Viera A, Rufas JS, Perrin N, Veyrunes F, Page J (2020) Meiosis reveals the early steps in the evolution of a neo-XY sex chromosome pair in the African pygmy mouse Mus minutoides. PLOS Genetics 16 (11): e1008959. [Plateforme Cytogénomique]

Gillespie LM, Fromin N, Milcu A, Buatois B, Pontoizeau C, Hättenschwiler S (2020) Higher tree diversity increases soil microbial resistance to drought. Communications Biology  3 (1): 377. [Plateforme PACE]

Gomes Rodrigues H, Tabuce R, Asher RJ, Hautier L (2020) Developmental origins and homologies of the hyracoid dentition. Evolution & Development 22: 323-335. [Plateforme Microtomographie RX]

Hadjadji I, Laabir M, Frihi H, Collos Y, Shao ZJ, Berrebi P, Abadie E, Amzil Z, Chomérat N, Rolland JL, Rieuvilleneuve F, Masseret E (2020) Unsuspected intraspecific variability in the toxin production, growth and morphology of the dinoflagellate Alexandrium pacificum R.W. Litaker (Group IV) blooming in a South Western Mediterranean marine ecosystem, Annaba Bay (Algeria). Toxicon 180: 79-88. [Plateforme Microbex]

Imai Y, Biot M, Clément JAJ, Teragaki M, Urbach S, Robert T, Baudat F, Grey C, de Massy B (2020) PRDM9 activity depends on HELLS and promotes local 5- hydroxymethylcytosine enrichment. eLife 9: e57117. [Plateforme Epigénomique]

Jaonalison H, Durand JD, Mahafina J, Demarcq H, Lagarde R, Ponton D (2020) Spatial and interannual variability of presettlement tropical fish assemblages explained by remote sensing oceanic conditions. Marine Biodiversity 50 (4): 52. [Plateforme GenSeq]

Joffard N, Arnal V, Buatois B, Schatz B, Montgelard C, Dafni A (2020a) Floral scent evolution in the section Pseudophrys: pollinator‐mediated selection or phylogenetic constraints? Plant Biology 22 (5): 881-889. [Plateforme PACE]

Joffard N, Le Roncé I, Langlois A, Renoult J, Buatois B, Dormont L, Schatz B (2020b) Floral trait differentiation in Anacamptis coriophora: phenotypic selection on scents, but not on colour. Journal of Evolutionary Biology 33: 1028-1038. [Plateforme TE & Plateforme PACE]

Joly F-X, Coq S, Coulis M, David J-F, Hättenschwiler S, Mueller CW, Prater I, Subke J-A (2020) Detritivore conversion of litter into faeces accelerates organic matter turnover. Communications Biology 3 (1): 660. [Plateforme TE & Plateforme PACE]

Jourdain E, Karoliussen R, de Vos J, Zakharov SE, Tougard C (2020) Killer whales (Orcinus orca) feeding on lumpfish (Cyclopterus lumpus) in northern Norway. Marine Mammal Science 36 (1): 89-102. [Plateforme GenSeq]

Kokolo B, Attéké Nkoulémbéné C, Ibrahim B, M'Batchi B, Blatrix R (2020) Phenotypic plasticity in size of ant-domatia. Scientific Reports 10: 20948. [Plateforme TE]

Laroche L, Ravel S, Baldet T, Lancelot R, Chandre F, Rossignol M, Le Goff V, Duhayon M, Fafet JF, Parker AG, Bouyer J (2020) Boosting the sterile insect technique with pyriproxyfen increases tsetse flies Glossina palpalis gambiensis sterilization in controlled conditions. Scientific Reports 10 (1): 9947. [Vectopole]

Le Roncé I, Toïgo M, Dardevet E, Venner S, Limousin J-M, Chuine I (2020) Resource manipulation through experimental defoliation has legacy effects on allocation to reproductive and vegetative organs in Quercus ilex. Annals of Botany 126 (7): 1165- 1179. [Projet Equipe de Recherche Junior Cemeb & Plateforme TE & Plateforme PACE]

Le Verger K, Hautier L, Bardin J, Gerber S, Delsuc F, Billet G (2020) Ontogenetic and static allometry in the skull and cranial units of nine-banded armadillos (Cingulata: Dasypodidae: Dasypus novemcinctus). Biological Journal of the Linnean Society 131: 673-698. [Plateforme Microtomographie RX]

Lenormand T, Fyon F, Sun E, Roze D (2020) Sex chromosome degeneration by regulatory evolution. Current Biology 30: 3001-3006. [Plateforme MBB]

Madrieres S, Tatard C, Murri S, Vulin J, Galan M, Piry S, Pulido C, Loiseau A, Artige E, Benoit L, Lemenager N, Lakhdar L, Charbonnel N, Marianneau P, Castel G (2020) How bank vole-PUUV interactions influence the eco-evolutionary processes driving Nephropathia Epidemica epidemiology - an experimental and genomic approach. Pathogens 9 (10): 789. [Plateforme GenSeq]

Mahaut L, Fort F, Violle C, Freschet GT (2020) Multiple facets of diversity effects on plant productivity: species richness, functional diversity, species identity and intraspecific competition. Functional Ecology 34 (1): 287–298. [Plateforme PACE]

Mallil K, Justy F, Rueness EK, Dufour S, Totis T, Bloch C, Baarman J, Amroun M, Gaubert  P (2020) Population genetics of the African wolf (Canis lupaster) across its range:  first evidence of hybridization with domestic dogs in Africa. Mammalian Biology 100 (6): 645-658. [Plateforme ADN dégradé & Plateforme GenSeq]

Manel S, Guerin P-E, Mouillot D, Blanchet S, Velez L, Albouy C, Pellissier L (2020) Global determinants of freshwater and marine fish genetic diversity. Nature Communications 11 (1): 692. [Plateforme MBB]

Marivaux L, Aguirre-Diaz W, Benites-Palomino A, Billet G, Boivin M, Pujos F, Salas- Gismondi R, Tejada-Lara JV, Varas-Malca RM, Antoine PO (2020a) New record of Neosaimiri (Cebidae, Platyrrhini) from the late Middle Miocene of Peruvian Amazonia. Journal of Human Evolution 146: 102835. [Plateforme Microtomographie RX]

Marivaux L, Salas-Gismondi R, Antoine P-O (2020b) 3D models related to the publication: New record of Neosaimiri (Cebidae, Platyrrhini) from the late Middle Miocene of Peruvian Amazonia. MorphoMuseuM 6: e119. [Plateforme Microtomographie RX]

Marivaux L, Velez-Juarbe J, Antoine P-O (2020c) 3D models related to the publication: Early Oligocene chinchilloid caviomorphs from Puerto Rico and the initial rodent colonization of the West Indies. MorphoMuseuM 6: e127. [Plateforme Microtomographie RX]

Marivaux L, Vélez-Juarbe J, Merzeraud G, Pujos F, Viñola López LW, Boivin M, Santos- Mercado H, Cruz EJ, Grajales A, Padilla J, Vélez-Rosado KI, Philippon M, Léticée  JL, Münch P, Antoine PO (2020d) Early Oligocene chinchilloid caviomorphs from Puerto Rico and the initial rodent colonization of the West Indies. Proceedings of the Royal Society B: Biological Sciences 287 (1920): 20192806. [Plateforme Microtomographie RX]

Marques JP, Seixas FA, Farelo L, Callahan CM, Good JM, Montgomery WI, Reid N, Alves PC, Boursot P, Melo-Ferreira J (2020a) An annotated draft genome of the mountain hare (Lepus timidus). Genome Biology and Evolution 12 (1): 3656-3662. [Plateforme MBB]

Marques R, Bonnet D, Carré C, Roques C, Darnaude AM (2020b) Trophic ecology of a blooming jellyfish (Aurelia coerulea) in a Mediterranean coastal lagoon. Limnology and Oceanography 66 (1): 141-157. [Plateforme Microbex]

Martin J-L, Chamaillé S, Waller DM (2020) Deer, wolves, and human society:  Costs, benefits, and challenges in living together. Biological Reviews 95 (3): 782-801. [Chercheur invité CeMEB]

Martinez Q, Clavel J, Esselstyn JA, Achmadi AS, Grohé C, Pirot N, Fabre PH (2020) Convergent evolution of olfactory and thermoregulatory capacities in small amphibious mammals. Proceedings of the National Academy of Sciences, USA 117: 8958-8965. [Plateforme Microtomographie RX]

Merino-Martín L, Griffiths RI, Gweon HS, Furget-Bretagnon C, Oliver A, Mao Z, Le Bissonnais Y, Stokes A (2020) Rhizosphere bacteria are more strongly related to plant root traits than fungi in temperate montane forests: insights from closed and open forest patches along an elevational gradient. Plant and Soil 450: 183-200. [Plateforme TE]

Miralles A, Geniez P, Beddek M, Aranda DM, Brito JC, Leblois R, Crochet P-A (2020) Morphology and multilocus phylogeny of the spiny-footed lizard (Acanthodactylus erythrurus) complex reveal two new mountain species from the Moroccan Atlas. Zootaxa 4747 (2): 302-326. [Projet exploratoire Cemeb]

Moreaux V, Longdoz B, Berveiller D, Delpierre N, Dufrêne E, Bonnefond J-M, Chipeaux C, Joffre R, Limousin J-M, Ourcival J-M, Klumpp K, Darsonville O, Brut A, Tallec T, Ceschia E, Panthou G, Loustau D (2020) Environmental control of land-atmosphere CO2 fluxes from temperate ecosystems: a statistical approach based on homogenized time series from five land-use types. Tellus B: Chemical and Physical Meteorology 72 (1): 1-25. [Plateforme TE]

Murri S, Madrières S, Tatard C, Piry S, Benoit L, Loiseau A, Pradel J, Artige E, Audiot P, Leménager N, Lacôte S, Vulin J, Charbonnel N, Marianneau P, Castel G (2020) Detection and genetic characterization of Puumala Orthohantavirus S-Segment in areas of France non-endemic for nephropathia epidemica. Pathogens 9 (9): 721.  [Projet exploratoire Cemeb]

North HL, Caminade P, Severac D, Belkhir K, Smadja CM (2020) The role of copy-number variation in the reinforcement of sexual isolation between the two European  subspecies of the house mouse. Philosophical Transactions of the Royal Society B: Biological Sciences 375 (1806): 20190540. [Plateforme MBB]

Nurhayu W, Nila S, Widayati KA, Rianti P, Suryobroto B, Raymond M (2020) Handedness heritability in industrialized and nonindustrialized societies. Heredity 124 (2): 313-324. [Plateforme MBB]

Oelze VM, Percher AM, Nsi Akoué G, El Ksabi N, Willaume E, Charpentier MJE (2020) Seasonality and interindividual variation in mandrill feeding ecology revealed by stable isotope analyses of hair and blood. American Journal of Primatology 82 (12): e23206. [Plateforme PACE]

Orliac MJ, Orliac C, Orliac MC, Hautin A (2020) A delphinid petrosal bone from a gravesite on Ahu Tahai, Easter Island: taxonomic attribution, external and internal morphology. MorphoMuseuM 6: e91. [Plateforme Microtomographie RX]

Paradis E (2020) Modelling transition in land cover highlights forest losses and gains in Southeast Asia. Biodiversity and Conservation 29 (8): 2539-2551. [Plateforme MBB]

Paschalis A, Fatichi S, Zscheischler J, Ciais P, Bahn M, Boysen L, Chang JF, De Kauwe M, Estiarte M, Goll D, Hanson PJ, Harper AB, Hou EQ, Kigel J, Knapp AK, Larsen KS, Li W, Lienert S, Luo YQ, Meir P, Nabel J, Ogaya R, Parolari AJ, Peng CH, Penuelas J, Pongratz J, Rambal S, Schmidt IK, Shi H, Sternberg M, Tian HQ, Tschumi E, Ukkola A, Vicca S, Viovy N, Wang YP, Wang ZN, Williams K, Wu DH, Zhu QA (2020) Rainfall manipulation experiments as simulated by terrestrial biosphere  models: Where do we stand? Global Change Biology 26: 3336-3355.

Perrin A, Gosselin-Grenet A-S, Rossignol M, Ginibre C, Scheid B, Lagneau C, Chandre F, Baldet T, Ogliastro M, Bouyer J (2020) Variation in the susceptibility of urban Aedes mosquitoes infected with a densovirus. Scientific Reports 10 (1): 18654. [Vectopole]

Pringault O, Bouvy M, Carre C, Fouilland E, Meddeb M, Mejri K, Leboulanger C, Sakka Hlaili A (2020) Impacts of chemical contamination on bacterio-phytoplankton coupling. Chemosphere 257: 127165. [Plateforme Microbex]

Proffit M, Lapeyre B, Buatois B, Deng XX, Arnal P, Gouzerh F, Carrasco D, Hossaert- McKey M (2020) Chemical signal is in the blend: bases of plant-pollinator encounter in a highly specialized interaction. Scientific Reports 10: 10071. [Plateforme PACE]

Quéméré E, Rossi S, Petit E, Marchand P, Merlet J, Game Y, Galan M, Gilot-Fromont E (2020) Genetic epidemiology of the Alpine ibex reservoir of persistent and virulent brucellosis outbreak. Scientific Reports 10 (1): 4400. [Plateforme GenSeq]

Ranoarisoa MP, Trap J, Pablo A-L, Dezette D, Plassard C (2020) Micro-food web  interactions involving bacteria, nematodes, and mycorrhiza enhance tree P nutrition in a high P-sorbing soil amended with phytate. Soil Biology and Biochemistry 143: 107728. [Plateforme EcoTrop]

Rataud A, Dupraz M, Toty C, Blanchon T, Vittecoq M, Choquet R, McCoy KD (2020) Evaluating functional dispersal in a nest ectoparasite and its eco-epidemiological implications. Frontiers in Veterinary Science 7: 570157. [Projet exploratoire Cemeb]

Rescan M, Grulois D, Ortega-Aboud E, Chevin L-M (2020) Phenotypic memory drives population growth and extinction risk in a noisy environment. Nature Ecology & Evolution 4: 193–201. [Plateforme GenSeq]

Rode NO, Courtier-Orgogozo V, Débarre F (2020) Can a population targeted by a CRISPR- based homing gene drive be rescued? G3: Genes Genomes Genetics 10 (9): 3403- 3415. [Post-doctorat Cemeb]

Rodrigues L, Sprafke T, Bokatola Moyikola C, Barthès BG, Bertrand I, Comptour M, Rostain S, Yoka J, McKey D (2020) A Congo Basin ethnographic analogue of pre-Columbian Amazonian raised fields shows the ephemeral legacy of organic matter management. Scientific Reports 10 (1): 10851 [Projet exploratoire Cemeb & Plateforme EcoTrop]

Roques C, Grousset E, Troussellier M, Hermet S, Le Carrer J, Sar C, Caro A (2020) A trade- off between mucocytes and bacteriocytes in Loripes orbiculatus gills (Bivalvia, Lucinidae): a mixotrophic adaptation to seasonality and reproductive status in a symbiotic species? Marine Biology 167 (10):  [Plateforme Microbex]

Rossi LMW, Mao Z, Merino-Martín L, Roumet C, Fort F, Taugourdeau O, Boukcim H, Fourtier S, Del Rey-Granado M, Chevallier T, Cardinael R, Fromin N, Stokes A (2020) Pathways to persistence: plant root traits alter carbon accumulation in different soil carbon pools. Plant and Soil 452 (1-2): 457-478. [Plateforme PACE]

Roy L, Taudière A, Papaïx J, Blatrix R, Chiron G, Zriki G, Bonato O, Barnagaud JY (2020) Evaluating the link between predation and pest control services in the mite world. Ecology and Evolution 10 (18): 9968-9980. [Doctorat Cemeb & Plateforme PACE & Plateforme TE]

Salomón RL, Steppe K, Ourcival J-M, Villers S, Rodríguez-Calcerrada J, Schapman R, Limousin J-M (2020) Hydraulic acclimation in a Mediterranean oak subjected to permanent throughfall exclusion results in increased stem hydraulic capacitance.  Plant, Cell and Environment 43: 1528-1544. [Plateforme TE]

Sauvadet M, Saj S, Freschet GT, Essobo JD, Enock S, Becquer T, Tixier P, Harmand JM, Magrach A (2020) Cocoa agroforest multifunctionality and soil fertility explained by shade tree litter traits. Journal of Applied Ecology 57 (3): 476-487. [Plateforme EcoTrop]

Segrestin J, Navas M-L, Garnier E (2020) Reproductive phenology as a dimension of the phenotypic space in 139 plant species from the Mediterranean. New Phytologist 225: 740-753. [Plateforme TE]

Shihan A, Volaire F, Hättenschwiler S (2020) Neighbor identity affects growth and survival of Mediterranean plants under recurrent drought. Oecologia 194: 555-569.  [Plateforme TE]

Sholihah A, Delrieu-Trottin E, Sukmono T, Dahruddin H, Risdawati R, Elvyra R, Wibowo A, Kustiati K, Busson F, Sauri S, Nurhaman U, Dounias E, Zein MSA, Fitriana Y, Utama IV, Muchlisin ZA, Agnèse J-F, Hanner R, Wowor D, Steinke D, Keith P, Rüber L, Hubert N (2020) Disentangling the taxonomy of the subfamily Rasborinae (Cypriniformes, Danionidae) in Sundaland using DNA barcodes. Scientific Reports 10 (1): 2818. [Plateforme GenSeq]

Simon A, Arbiol C, Nielsen EE, Couteau J, Sussarellu R, Burgeot T, Bernard I, Coolen JWP, Lamy J-B, Robert S, Skazina M, Strelkov P, Queiroga H, Cancio I, Welch JJ, Viard F, Bierne N (2020) Replicated anthropogenic hybridisations reveal parallel patterns of admixture in marine mussels. Evolutionary Applications 13 (3): 575–599. [Plateforme GenSeq & Plateforme MBB]

Souquet L, Corradini C, Girard C (2020a) 3D models related to the publication: Siphonodella leiosa (Conodonta), a new unornamented species from the Tournaisian (lower Carboniferous) of Puech de la Suque (Montagne Noire, France). MorphoMuseuM 6 (3): e115. [Projet exploratoire Cemeb]

Souquet L, Corradini C, Girard C (2020b) Siphonodella leiosa (Conodonta), a new unornamented species from the Tournaisian (lower Carboniferous) of Puech de la Suque (Montagne Noire, France). Geobios 61: 55-60. [Projet exploratoire Cemeb]

Sow A, Haran J, Benoit L, Galan M, Brevault T (2020a) DNA metabarcoding as a tool for disentangling food webs in agroecosystems. Insects 11 (5): 294. [Plateforme GenSeq]

Sow A, Seye D, Faye E, Benoit L, Galan M, Haran J, Brevault T (2020b) Birds and bats contribute to natural regulation of the millet head miner in tree-crop agroforestry systems. Crop Protection 132: 105127. [Plateforme GenSeq]

Stojanova B, Maurice S, Cheptou P-O (2020) Season-dependent effect of cleistogamy in Lamium amplexicaule: flower type origin versus inbreeding status. American Journal of Botany 107 (1): 155-163. [Plateforme TE]

Thoumazeau A, Chevallier T, Baron V, Rakotondrazafy N, Panklang P, Marichal R, Kibblewhite M, Sebag D, Tivet F, Bessou C, Gay F, Brauman A (2020) A new in- field indicator to assess the impact of land management on soil carbon dynamics. Geoderma 375: 114496. [Projet Equipe de Recherche Junior Cemeb & Plateforme PACE & Plateforme EcoTrop]

Tournayre O, Leuchtmann M, Filippi-Codaccioni O, Trillat M, Piry S, Pontier D, Charbonnel N, Galan M (2020) In silico and empirical evaluation of twelve metabarcoding primer sets for insectivorous diet analyses. Ecology and Evolution 10 (13): 6310-6332. [Doctorat Cemeb & Projet Equipe de Recherche Junior Cemeb & Plateforme GenSeq]

Trombetta T, Vidussi F, Roques C, Scotti M, Mostajir B (2020) Marine microbial food web networks during phytoplankton bloom and non-bloom periods: warming favors  smaller organism interactions and intensifies trophic cascade. Frontiers in Microbiology 11: 502336. [Plateforme Microbex]

Vaissière A-C, Calvet C, Quétier F, Latune J (2020a) Quelles implications possibles du  monde agricole dans la compensation écologique ? Vers des approches territoriales. Sciences, Eaux & Territoires 31: 38-43. [Post-doctorat Cemeb]

Vaissière A-C, Quétier F, Calvet C, Levrel H, Wunder S (2020b) Biodiversity offsets and payments for environmental services: clarifying the family ties. Ecological Economics 169: 106428. [Post-doctorat Cemeb]

Van der Geest M, Van der Heide T, Holmer M, DeWit R (2020) First field-based evidence that the seagrass-lucinid mutualism can mitigate sulfide stress in seagrasses. Frontiers in Marine Science 7: 11. [Post-doctorat Cemeb]

Vandeputte M, Clota F, Sadoul B, Blanc M-O, Blondeau-Bidet E, Bégout M-L, Cousin X, Geffroy B (2020) Low temperature has opposite effects on sex determination in a marine fish at the larval/postlarval and juvenile stages. Ecology and Evolution 10 (24): 13825-13835. [Plateforme GenSeq]

Vautrin Q, Lihoreau F, Sambou B, Thiam M, Martin JE, Tabuce R, Adnet S, Lebrun R, Charruault A-L, Sarr R, Hautier L (2020) From limb to fin: an Eocene protocetid forelimb from Senegal sheds new light on the early locomotor evolution of cetaceans. Palaeontology 63:  [Plateforme Microtomographie RX]

Vezy R, le Maire G, Christina M, Georgiou S, Imbach P, Hidalgo HG, Alfaro EJ, Blitz- Frayret C, Charbonnier F, Lehner P, Loustau D, Roupsard O (2020) DynACof: A process-based model to study growth, yield and ecosystem services of coffee agroforestry systems. Environmental Modelling & Software 124: 104609. [Plateforme MBB]

Villette P, Afonso E, Couval G, Levret A, Galan M, Goydadin AC, Cosson JF, Giraudoux P (2020) Spatio-temporal trends in richness and persistence of bacterial communities in decline-phase water vole populations. Scientific Reports 10 (1): 9506. [Plateforme GenSeq]

Vogt-Schilb H, Tesitelova T, Kotilinek M, Suchacek P, Kohout P, Jersakova J (2020) Altered rhizoctonia assemblages in grasslands on ex-arable land support germination of mycorrhizal generalist, not specialist orchids. New Phytologist 227: 1200-1212. [Plateforme TE]

Volaire F, Morvan-Bertrand A, Prud’homme M-P, Benot M-L, Augusti A, Zwicke M, Roy J, Landais D, Picon-Cochard C (2020) The resilience of perennial grasses under two climate scenarios is correlated with carbohydrate metabolism in meristems. Journal of Experimental Botany 71 (1): 370-385. [Plateforme TE]

Weemstra M, Freschet GT, Stokes A, Roumet C (2020) Patterns in intraspecific variation in root traits are species-specific along an elevation gradient. Functional Ecology 35: 342-356. [Plateforme PACE]

Williams HJ, Taylor LA, Benhamou S, Bijleveld AI, Clay TA, de Grissac S, Demsar U, English HM, Franconi N, Gómez-Laich A, Griffiths RC, Kay WP, Morales JM, Potts JR, Rogerson KF, Rutz C, Spelt A, Trevail AM, Wilson RP, Börger L (2020) Optimizing the use of bio-loggers for movement ecology research. Journal of Animal Ecology 89: 186-206. [Plateforme TE]

Zhou S, Butenschoen O, Barantal S, Handa IT, Makkonen M, Vos V, Aerts R, Berg MP, McKie B, Van Ruijven J, Hättenschwiler S, Scheu S (2020) Decomposition of leaf litter mixtures across biomes: the role of litter identity, diversity and soil fauna. Journal of Ecology 108: 2283–2297. [Plateforme TE]

Zriki G, Blatrix R, Roy L (2020) Predation interactions among henhouse‐dwelling arthropods, with a focus on the poultry red mite Dermanyssus gallinae. Pest Management Science 76 (11): 3711-3719. [Doctorat Cemeb & Plateforme PACE & Plateforme TE]


Informations complémentaires: 
Publications 2019 thanks to CEMEB fundings

Exploratory projects, ERJ, doctoral and post-doct, labeled platforms and invited scientists

Altinli M, Lequime S, Courcelle M, Francois S, Justy F, Gosselin-Grenet AS, Ogliastro M, Weill M, Sicard M (2019a) Evolution and phylogeography of Culex pipiens densovirus. Virus Evolution 5 (2): vez053. [Plateforme GenSeq]

Altinli M, Soms J, Ravallec M, Justy F, Bonneau M, Weill M, Gosselin-Grenet AS, Sicard M (2019b) Sharing cells with Wolbachia: the transovarian vertical transmission of Culex pipiens densovirus. Environmental Microbiology 21 (9): 3284-3298. [Plateforme q-PCR haut débit]

Augusto RdC, Cosseau C, Grunau C (2019) Histone methylome of the human parasite Schistosoma mansoni In: Jurga S, Barciszewski J (eds) The DNA, RNA, and Histone Methylomes. Springer International Publishing, Cham, pp 607-624. [Plateforme Epigénomique]

Aumeeruddy-Thomas Y, Hmimsa Y (2019) Fig and olive domestication in the Rif, northern Morocco: entangled human and tree lives and history. In: Stépanoff C, Vigne J-D (eds) Hybrid communities: biosocial approaches to domestication and other trans-species relationships. Routledge, Abingdon, UK, pp 179-196. [Plateforme TE]

Aupic-Samain A, Baldy V, Lecareux C, Fernandez C, Santonja M (2019) Tree litter identity and predator density control prey and predator demographic parameters in a Mediterranean litter-based multi-trophic system. Pedobiologia 73: 1–9. [Plateforme PACE]

Baudat F, de Massy B, Veyrunes F (2019) Sex chromosome quadrivalents in oocytes of the African pygmy mouse Mus minutoides that harbors non-conventional sex chromosomes. Chromosoma 128 (3): 397-411. [Plateforme Cytogénomique]

Binetruy F, Dupraz M, Buysse M, Duron O (2019) Surface sterilization methods impact measures of internal microbial diversity in ticks. Parasites & Vectors 12 (1): 268. [Plateforme GenSeq]

Blondeau-Bidet E, Hiroi J, Lorin-Nebel C (2019) Ion uptake pathways in European sea bass Dicentrarchus labrax. Gene 692: 126-137. [Plateforme q-PCR haut débit]

Bonneau M, Caputo B, Ligier A, Caparros R, Unal S, Perriat-Sanguinet M, Arnoldi D, Sicard M, Weill M (2019) Variation in Wolbachia cidB gene, but not cidA, is associated with cytoplasmic incompatibility mod phenotype diversity in Culex pipiens. Molecular Ecology 28 (21): 4725-4736. [Plateforme GenSeq]

Bourgarel M, Noël V, Pfukenyi D, Michaux J, André A, Becquart P, Cerqueira F, Barrachina C, Boué V, Talignani L, Matope G, Missé D, Morand S, Liégeois F (2019) Next-generation sequencing on insectivorous bat guano: an accurate tool to identify arthropod viruses of potential agricultural concern. Viruses 11 (12): 1102. [Plateforme GenSeq & Projet exploratoire Cemeb]

Bourgeois B, Munoz F, Fried G, Mahaut L, Armengot L, Denelle P, Storkey J, Gaba S, Violle C (2019) What makes a weed a weed? A large-scale evaluation of arable weeds through a functional lens. American Journal of Botany 106: 90-100. [Plateforme TE]

Bristiel P, Roumet C, Violle C, Volaire F, 434: (2019) Coping with drought: root trait variability within the perennial grass Dactylis glomerata captures a trade-off between dehydration avoidance and dehydration tolerance. Plant and Soil 434: 327-342. [Plateforme TE & Plateforme PACE]

Buysse M, Plantard O, McCoy KD, Duron O, Menard C (2019) Tissue localization of Coxiella-like endosymbionts in three European tick species through fluorescence in situ hybridization. Ticks and Tick Borne Diseases 10 (4): 798-804. [Projet exploratoire Cemeb]

Bykova O, Chuine I, Morin X (2019) Highlighting the importance of water availability in reproductive processes to understand climate change impacts on plant biodiversity. Perspectives in Plant Ecology, Evolution and Systematics 37: 20-25. [Post-doctorat Cemeb]

Calvet C, Le Coënt P, Quétier F, Napoleone C (2019) Challenges of achieving biodiversity offsetting through agri-environmental schemes: evidence from an empirical study. Ecological Economics 163: 113-125. [Post-doctorat Cemeb]

Calvet C, Salles JM (2019) Entre intégrité écologique et efficacité économique: analyse d’une politique d’absence de perte nette écologique. Revue juridique de l'environnement 44 (3): 517-529. [Post-doctorat Cemeb]

Calvez V, Gabriel P, González ÁM (2019) Limiting Hamilton-Jacobi equation for the large scale asymptotics of a subdiffusion jump-renewal equation. Asymptotic Analysis 115 (1-2): 63-94. [Post-doctorat Cemeb]

Caro SP, Cornil CA, van Oers K, Visser ME (2019) Personality and gonadal development as sources of individual variation in response to GnRH challenge in female great tits. Proceedings of the Royal Society B, Biological Sciences 286 (1902): 20190142. [Plateforme TE]

Castel G, Chevenet F, Razzauti M, Murri S, Marianneau P, Cosson JF, Tordo N, Plyusnin A (2019) Phylogeography of Puumala orthohantavirus in Europe. Viruses 11 (8): 679. [Projet exploratoire Cemeb]

Chao L, Liu YY, Freschet GT, Zhang WD, Yu X, Zheng WH, Guan X, Yang QP, Chen LC, Dijkstra FA, Wang SL (2019) Litter carbon and nutrient chemistry control the magnitude of soil priming effect. Functional Ecology 33: 876-888. [Plateforme TE]

Charbonnel N, Galan M, Tatard C, Loiseau A, Diagne CA, Dalecky A, Parrinello H, Rialle S, Severac D, Brouat C (2019) Differential immune gene expression associated with contemporary range expansion of two invasive rodents in Senegal. PCI Ecology bioRxiv 442160, ver 4: peer-reviewed and recommended by PCI Ecology. [Plateforme GenSeq]

Chevenet F, Castel G, Jousselin E, Gascuel O (2019) PastView: a user-friendly interface to explore ancestral scenarios. BMC Evolutionary Biology 19 (1): 163. [Projet exploratoire Cemeb]

Clergeot PH, Rode NO, Glemin S, Brandstrom-Durling M, Ihrmark K, Olson A (2019) Estimating the fitness effect of deleterious mutations during the two phases of the life cycle: A new method applied to the root-rot fungus Heterobasidion parviporum. Genetics 211 (3): 963-976. [Post-doctorat Cemeb]

Corse E, Tougard C, Archambaud-Suard G, Agnese JF, Messu Mandeng FD, Bilong Bilong CF, Duneau D, Zinger L, Chappaz R, Xu CCY, Meglecz E, Dubut V (2019) One-locus-several-primers: A strategy to improve the taxonomic and haplotypic coverage in diet metabarcoding studies. Ecology and Evolution 9 (8): 4603-4620. [Plateforme ADN dégradé]

Cortés D, C. de Gracia, Carrillo-Briceño JD, Aguirre-Fernandez G, Jaramillo C, Benites-Palomino A, Atencio-Arauz JE (2019) Shark-cetacean trophic interactions during the late Pliocene in the Central Eastern Pacific (Panama). Paleontologia Electronica 22 (2): 49A. [Chercheur invité CeMEB]

Courcelle M, Tilak MK, Leite YLR, Douzery EJP, Fabre PH (2019) Digging for the spiny rat and hutia phylogeny using a gene capture approach, with the description of a new mammal subfamily. Molecular Phylogenetics and Evolution 136: 241-253. [Plateforme MBB]

Debiais-Thibaud M, Simion P, Venteo S, Munoz D, Marcellini S, Mazan S, Haitina T (2019) Skeletal mineralization in association with type X collagen expression is an ancestral feature for jawed vertebrates. Molecular Biology and Evolution 36 (10): 2265-2276. [Plateforme MBB]

Decombeix A-L, Galtier J, McLoughlin S, Meyer-Berthaud B, Webb GE, Blake PR (2019) Early Carboniferous lignophyte tree diversity in Australia: Woods from the Drummond and Yarrol basins, Queensland. Review of Palaeobotany and Palynology 263: 47-64. [Projet exploratoire Cemeb]

Desoutter A, Yusuf Solieman O, Subsol G, Fages M, Cuisinier F (2019) Method to approximate intra oral scanner noise and resolution. Lasers in Dentistry XXV, vol 10857. SPIE. doi:10.1117/12.2509460

Dubart M, Pantel JH, Pointier JP, Jarne P, David P (2019) Modeling competition, niche, and coexistence between an invasive and a native species in a two-species metapopulation. Ecology 100 (6): e02700. [Plateforme MBB]

Dukic M, Berner D, Haag CR, Ebert D (2019) How clonal are clones? A quest for loss of heterozygosity during asexual reproduction in Daphnia magna. Journal of Evolutionary Biology 32: 619-628. [Plateforme TE]

Errouissi F, Jay-Robert P (2019) Consequences of habitat change in euromediterranean landscapes on the composition and diversity of dung beetle assemblages (Coleoptera, Scarabaeoidea). Journal of Insect Conservation 23: 15-28. [Plateforme TE]

Eugenia Nunez-Valdez M, Lanois A, Pages S, Duvic B, Gaudriault S (2019) Inhibition of Spodoptera frugiperda phenoloxidase activity by the products of the Xenorhabdus rhabduscin gene cluster. PLoS One 14 (2): e0212809. [Plateforme q-PCR haut débit]

Faivre B, Bellenger J, Rieu A, Guivier E, Galan M, Ollivier A, Poloni L, Sorci G (2019) Disentangling the effect of host genetics and gut microbiota on resistance to an intestinal parasite. International Journal of Parasitology 49 (11): 873-883. [Plateforme GenSeq]

Ferreira-Cardoso S, Delsuc F, Hautier L (2019) Evolutionary tinkering of the mandibular canal linked to convergent regression of teeth in placental mammals. Current Biology 29 (3): 468-475. [Plateforme Microtomographie RX]

Fontès H, Gazaix A, Papuga G (2019) Heterogeneous forest structures favor persistence of the grassland Mediterranean geophyte Gagea lacaitae. Botany Letters 166 (4): 487–498. [Plateforme PACE]

François S, Mutuel D, Duncan A, Rodrigues L, Danzelle C, Lefevre S, Santos I, Frayssinet M, Fernandez E, Filloux D, Roumagnac P, Froissart R, Ogliastro M (2019) A new prevalent Densovirus discovered in Acari. Insight from metagenomics in viral communities associated with two-spotted mite (Tetranychus urticae) populations. Viruses 11 (3): 233. [Plateforme q-PCR haut débit]

Fréville H, Roumet P, Rode NO, Rocher A, Latreille M, Muller MH, David J (2019) Preferential helping to relatives: A potential mechanism responsible for lower yield of crop variety mixtures? Evolutionary Applications 12 (9): 1837-1849. [Post-doctorat Cemeb]

Galkowski C, Aubert C, Blatrix R (2019) Aphaenogaster ichnusa santschi, 1925, bona species, and redescription of Aphaenogaster subterranea (Latreille, 1798) (Hymenoptera, Formicidae). Sociobiology 66: 420-425. [Plateforme TE]

Gamble A, Garnier R, Jaeger A, Gantelet H, Thibault E, Tortosa P, Bourret V, Thiebot J-B, Delord K, Weimerskirch H, Tornos J, Barbraud C, Boulinier T (2019) Exposure of breeding albatrosses to the agent of avian cholera: dynamics of antibody levels and ecological implications. Oecologia 189 (4): 939-949. [Post-doctorat Cemeb]

Garba M, Loiseau A, Tatard C, Benoit L, Gauthier N (2019) Patterns and drivers of genetic diversity and structure in the biological control parasitoid Habrobracon hebetor in Niger. Bulletin of Entomological Research 109 (6): 794-811. [Plateforme GenSeq]

Garnier E, Vile D, Roumet C, Lavorel S, Grigulis K, Navas M-L, Lloret F (2019) Inter- and intra-specific trait shifts among sites differing in drought conditions at the north western edge of the Mediterranean Region. Flora 254: 147-160. [Projet exploratoire Cemeb & Plateforme TE]

Gaubert P, Justy F, Mo G, Aguilar A, Danyer E, Borrell A, Dendrinos P, Öztürk B, Improta R, Tonay AM, Karamanlidis AA (2019) Insights from 180 years of mitochondrial variability in the endangered Mediterranean monk seal (Monachus monachus). Marine Mammal Science 35 (4): 1489-1511. [Plateforme ADN dégradé]

Gauthier P, Bernard C, Thompson JD (2019a) Exploring vulnerability of listed Mediterranean plants in relation to risks of population loss. Journal for Nature Conservation 51: 125736. [Plateforme TE]

Gauthier P, Pons V, Fisogni A, Murru V, Berjano R, Dessena S, Maccioni A, Chelo C, de Manincor N, Doncieux A, Papuga G, Thompson JD (2019b) Assessing vulnerability of listed Mediterranean plants based on population monitoring. Journal for Nature Conservation 52: 125758. [Plateforme TE]

Gavinet J, Ourcival J-M, Limousin J-M (2019) Rainfall exclusion and thinning can alter the relationships between forest functioning and drought. New Phytologist 223: 1267-1279. [Plateforme TE]

Geoffroy F, Baumard N, Andre JB (2019) Why cooperation is not running away. Journal of Evolutionary Biology 32 (10): 1069-1081. [Plateforme MBB]

Gervasi V, Linnell JDC, Broseth H, Gimenez O (2019) Failure to coordinate management in trans-boundary populations hinders the achievement of national management goals: the case of wolverines in Scandinavia. Journal of Applied Ecology 56 (8): 1905-1915. [Post-doctorat Cemeb]

Giska I, Farelo L, Pimenta J, Seixas FA, Ferreira MS, Marques JP, Miranda I, Letty J, Jenny H, Hacklander K, Magnussen E, Melo-Ferreira J (2019) Introgression drives repeated evolution of winter coat color polymorphism in hares. Proceedings of the National Academy of Sciences, USA 116 (48): 24150-24156. [Plateforme MBB]

Godefroy N, Le Goff E, Martinand-Mari C, Belkhir K, Vacelet J, Baghdiguian S (2019) Sponge digestive system diversity and evolution: filter feeding to carnivory. Cell Tissue Research 377 (3): 341-351. [Plateforme MBB]

Hima K, Granjon L, Gauthier P, Ndiaye A, Brouat C, Dobigny G (2019) Population dynamics and genetics of Gerbillus nigeriae in Central Sahel: implications for rodent pest control. Ecology and Evolutionary Biology 4 (4): 45-54. [Plateforme GenSeq]

Houssaye A, Herrel A, Boistel R, Rage JC (2019) Adaptation of the vertebral inner structure to an aquatic life in snakes: Pachyophiid peculiarities in comparison to extant and extinct forms. Comptes Rendus - Palevol 18: 783-799. [Plateforme Microtomographie RX]

Jaramillo C (2019) 140 Million years of tropical biome evolution. In: Gomez J, Pinilla-Chacon AO (eds) The Geology of Colombia, Volume 2 Mesozoic. Bogota, Colombia, pp 1-28 [Chercheur invité CeMEB]

Juhel AS, Barbu CM, Valantin-Morison M, Gauffre B, Leblois R, Olivares J, Franck P (2019) Limited genetic structure and demographic expansion of the Brassicogethes aeneus populations in France and in Europe. Pest Management Science 75 (3): 667-675. [Plateforme MBB]

Kazakou E, Vasseur F, Sartori K, Baron E, Rowe N, Vile D (2019) Secondary metabolites have more influence than morpho-physiological traits on litter decomposability across genotypes of Arabidopsis thaliana. New Phytologist 224: 1532-1543. [Plateforme TE]

Kjaer L, Skov V, Andersen MT, Aggerholm A, Clair P, Gniot M, Soeby K, Udby L, Dorff MH, Hasselbalch H, Pallisgaard N (2019) Variant-specific discrepancy when quantitating BCR-ABL1 e13a2 and e14a2 transcripts using the Europe Against Cancer qPCR assay. European Journal of Haematology 103 (1): 26-34. [Plateforme q-PCR haut débit]

Klafack S, Fiston-Lavier AS, Bergmann SM, Hammoumi S, Schroder L, Fuchs W, Lusiastuti A, Lee PY, Heredia SV, Master student consortium, Gosselin-Grenet AS, Avarre JC (2019) Cyprinid herpesvirus 3 evolves in vitro through an assemblage of haplotypes that alternatively become dominant or under-represented. Viruses 11 (8): E754. [Plateforme GenSeq, Plateforme MBB, Plateforme q-PCR haut débit & Projet exploratoire Cemeb]

Kokolo B, Atteke C, Mintsa BAE, Ibrahim B, McKey D, Blatrix R (2019) Congeneric mutualist ant symbionts (Tetraponera, Pseudomyrmecinae) differ in level of protection of their myrmecophyte hosts (Barteria, Passifloraceae). Journal of Tropical Ecology 35: 255-259. [Plateforme TE]

Le Bot T, Lescroël A, Fort J, Péron C, Gimenez O, Provost P, Grémillet D (2019) Fishery discards do not compensate natural prey shortage in Northern gannets from the English Channel. Biological Conservation 236: 375-384. [Doctorat Cemeb]

Leauthaud C, Hiernaux P, Musila W, Kergoat L, Grippa M, Duvail S, Albergel J, Rode NO (2019) Influence of floods and growth duration on the productivity of wet grasslands of Echinochloa stagnina (Retz) P. Beauv. in an East African floodplain. Wetlands 39 (5): 935-944. [Post-doctorat Cemeb]

Leclaire S, Chatelain M, Pessato A, Buatois B, Frantz A, Gasparini J (2019) Pigeon odor varies with experimental exposure to trace metal pollution. Ecotoxicology 28 (1): 76-85. [Plateforme PACE]

Madrieres S, Castel G, Murri S, Vulin J, Marianneau P, Charbonnel N (2019) The needs for developing experiments on reservoirs in Hantavirus research: accomplishments, challenges and promises for the future. Viruses 11 (7): 664. [Projet exploratoire Cemeb]

Marivaux L, Salas-Gismondi R, Antoine P-O (2019) 3D model related to the publication: A platyrrhine talus from the early Miocene of Peru (Amazonian Madre de Dios Sub-Andean Zone). MorphoMuseuM 5: e85. [Plateforme Microtomographie RX]

Mártin-Robles N, Morente-López J, Freschet GT, Poorter H, Roumet C, Milla R (2019) Root traits of herbaceous crops: pre-adaptation to cultivation or evolution under domestication? Functional Ecology 33: 273-285. [Plateforme TE]

Mautz BS, Rode NO, Bonduriansky R, Rundle HD (2019) Comparing ageing and the effects of diet supplementation in wild vs. captive antler flies, Protopiophila litigata. Journal of Animal Ecology 88 (12): 1913-1924. [Post-doctorat Cemeb]

Miralles A, Raymond M, Lecointre G (2019) Empathy and compassion toward other species decrease with evolutionary divergence time. Scientific Reports 9 (1): 19555. [Plateforme MBB]

Molinier C, Reisser CMO, Fields PD, Segard A, Galimov Y, Haag CR (2019) Evolution of gene expression during a transition from environmental to genetic sex determination. Molecular Biology and Evolution 36 (7): 1551-1564. [Plateforme GenSeq & Plateforme MBB]

Mourlam M, Orliac MJ (2019a) 3D models related to the publication: Early Evolution of the Ossicular Chain in Cetacea: Into the Middle Ear Gears of a Semi-Aquatic Protocetid Whale. MorphoMuseuM 5: e94. [Plateforme Microtomographie RX]

Mourlam MJ, Orliac MJ (2019b) Early evolution of the ossicular chain in Cetacea: Into the middle ear gears of a semi-aquatic protocetid whale. Proceedings of the Royal Society B: Biological Sciences 286: 1912. [Plateforme Microtomographie RX]

Olazcuaga L, Rode NO, Foucaud J, Facon B, Ravigné V, Ausset A, Leménager N, Loiseau A, Gautier M, Estoup A, Hufbauer RA (2019) Oviposition preference and larval performance of Drosophila suzukii (Diptera: Drosophilidae), spotted-wing Drosophila: effects of fruit identity and composition. Environmental Entomology 48 (4): 867-881. [Post-doctorat Cemeb & [Chercheur invité CeMEB]

Papuga G, Filigheddu R, Gauthier P, Farris E (2019) Variation in floral morphology in a hybrid complex of Cyclamen in Sardinia. Plant Ecology and Diversity 12 (1): 51-61. [Plateforme TE]

Pérez-Escobar OA, Lucas E, Jaramillo C, Monro A, Morris SK, Bogarin D, Greer D, Dodsworth P, Antonelli A (2019) The origin and diversification of the hyperdiverse flora in the Chocó biogeographic region. Frontiers in Plant Science 10: 1328. [Chercheur invité CeMEB]

Perrin W, Jay-Robert P, Buatois B, Tatin L (2019) A comparative analysis of dung beetle assemblages (Coleoptera: Scarabaeidae: Scarabaeinae, Aphodiinae) attracted to sheep and little bustard excrement in Southern France. The Coleopterists Bulletin 73 (1): 185–192. [Plateforme PACE]

Pinharanda A, Rousselle M, Martin SH, Hanly JJ, Davey JW, Kumar S, Galtier N, Jiggins CD (2019) Sexually dimorphic gene expression and transcriptome evolution provide mixed evidence for a fast-Z effect in Heliconius. Journal of Evolutionary Biology 32 (3): 194-204. [Plateforme MBB]

Portanier E, Garel M, Devillard S, Maillard D, Poissant J, Galan M, Benabed S, Poirel MT, Duhayer J, Itty C, Bourgoin G (2019) Both candidate gene and neutral genetic diversity correlate with parasite resistance in female Mediterranean mouflon. BMC Ecology 19: 12 [Plateforme GenSeq]

Potier S, Duriez O, Célérier A, Liegeois J-L, Bonadonna F (2019) Sight or smell: which senses do scavenging raptors use to find food? Animal Cognition 22 (1): 49-59. [Doctorat Cemeb]

Rataud A, Dupraz M, Toty C, Blanchon T, Vittecoq M, Choquet R, McCoy KD (2019) Evaluating functional dispersal and its eco-epidemiological implications in a nest ectoparasite (Version V3.0). PCI Ecology Zenodo 2592114, ver. 3: peer-reviewed and recommended by PCI Ecology. [Projet exploratoire Cemeb]

Riquet F, Liautard-Haag C, Woodall L, Bouza C, Louisy P, Hamer B, Otero-Ferrer F, Aublanc P, Beduneau V, Briard O, Ayari TE, Hochscheid S, Belkhir K, Arnaud-Haond S, Gagnaire P-A, Bierne N (2019) Parallel pattern of differentiation at a genomic island shared between clinal and mosaic hybrid zones in a complex of cryptic seahorse lineages. Evolution 73 (4): 817-835. [Post-doctorat Cemeb]

Rode NO, Estoup A, Bourguet D, Courtier-Orgogozo V, Débarre F (2019) Population management using gene drive: molecular design, models of spread dynamics and assessment of ecological risks. Conservation Genetics 20 (4): 671-690. [Post-doctorat Cemeb]

Roussel S, Tardieu L, Vaissière A-C (2019) Compensation écologique et agriculture : est-ce compatible ? Revue Economique 70 (1): 123-137. [Post-doctorat Cemeb]

Santonja M, Milcu A, Fromin N, Rancon A, Shihan A, Fernandez C, Baldy V, Hättenschwiler S (2019) Temporal shifts in plant diversity effects on carbon and nitrogen dynamics during litter decomposition in a Mediterranean shrubland exposed to reduced precipitation. Ecosystems 22 (5): 939-954. [Plateforme PACE]

Scornavacca C, Belkhir K, Lopez J, Dernat R, Delsuc F, Douzery EJP, Ranwez V (2019) OrthoMaM v10: scaling-up orthologous coding sequence and exon alignments with more than one hundred mammalian genomes. Molecular Biology and Evolution 36 (4): 861-862. [Plateforme MBB]

Sonnier G, Johnson SE, Waller DM, Rapson G (2019) Fragmentation reduces the importance of niche‐based factors relative to dispersal traits in structuring temperate forest understories. Journal of Vegetation Science 31 (1): 75-83. [Chercheur invité CeMEB]

Souquet L, Chevret P, Ganem G, Auffray J-C, Ledevin R, Agret S, Hautier L, Renaud S (2019) Back to the wild: does feralization affect the mandible of non-commensal house mice ( Mus musculus domesticus)? Biological Journal of the Linnean Society 126: 471-486. [Plateforme Microtomographie RX]

Sow A, Brevault T, Benoit L, Chapuis MP, Galan M, Coeur d'acier A, Delvare G, Sembene M, Haran J (2019) Deciphering host-parasitoid interactions and parasitism rates of crop pests using DNA metabarcoding. Scientific Reports 9 (1): 3646. [Plateforme GenSeq]

Tabuce R, Sarr R, Hautier L (2019) 3D model related to the publication: Filling a gap in the proboscidean fossil record: a new genus from the Lutetian of Senegal. MorphoMuseuM 5: e104. [Plateforme Microtomographie RX]

Tanrattana M, Barczi J-F, Decombeix A-L, Meyer-Berthaud B, Wilson J (2019a) A new approach for modeling water transport in fossil plants. IAWA Journal 40 (3): 466. [Projet exploratoire Cemeb]

Tanrattana M, Meyer-Berthaud B, Decombeix A-L (2019b) Callixylon wendtii sp. nov., a new species of archaeopteridalean progymnosperm from the Late Devonian of Anti-Atlas, Morocco. Earth and Environmental Science Transactions of the Royal Society of Edinburgh 108 (4): 373-385. [Projet exploratoire Cemeb]

Thompson JD, Amiot J, Borron C, Linhart YB, Keeefover-Ring K, Gauthier P (2019) Spatial heterogeneity of gall formation in relation to chemotype distribution in Thymus vulgaris. Plant Ecology 220: 777-788. [Plateforme TE]

Tonnabel J, David P, Klein EK, Pannell JR (2019a) Sex-specific selection on plant architecture through "budget" and "direct" effects in experimental populations of the wind-pollinated herb, Mercurialis annua. Evolution 73: 897-912. [Plateforme TE]

Tonnabel J, David P, Pannell JR (2019b) Do metrics of sexual selection conform to Bateman's principles in a wind-pollinated plant? Proceedings of the Royal Society B, Biological Sciences 286 (1905): 20190532. [Plateforme TE]

Tournayre O (2019) Génétique des populations et biologie de la conservation du Grand Rhinolophe. Plumes de Naturalistes 3: 249-258. [Doctorat Cemeb]

Tournayre O, Pons J-B, Leuchtmann M, Leblois R, Piry S, Filippi-Codaccioni O, Loiseau A, Duhayer J, Garin I, Mathews F, Puechmaille S, Charbonnel N, Pontier D (2019) Integrating population genetics to define conservation units from the core to the edge of Rhinolophus ferrumequinum Western range. Ecology and Evolution 9 (21): 12272-12290. [Doctorat Cemeb, Plateforme GenSeq & Plateforme MBB]

van der Geest M, van der Lely JAC, van Gils JA, Piersma T, Lok T (2019) Density-dependent growth of bivalves dominating the intertidal zone of Banc d’Arguin, Mauritania: importance of feeding mode, habitat and season. Marine Ecology Progress Series 610: 51-63. [Post-doctorat Cemeb]

Vasseur F, Fouqueau L, de Vienne D, Nidelet T, Violle C, Weigel D (2019) Nonlinear phenotypic variation uncovers the emergence of heterosis in Arabidopsis thaliana. PLoS Biology 17 (4): e3000214. [Plateforme TE]

Visconti V, Eychenne M, Darboux I (2019) Modulation of antiviral immunity by the ichnovirus HdIV in Spodoptera frugiperda. Molecular Immunology 108: 89-101. [Plateforme q-PCR haut débit]

Waller DM, Keller LF (2019) Inbreeding and inbreeding depression. In:  Oxford Encyclopedia of Evolutionary Biology. doi:10.1093/obo/9780199941728-0124 [Chercheur invité CeMEB]

Wierucka K, Barthes N, Harcourt R, Schaal B, Charrier I, Pitcher BJ (2019a) Chemical fingerprints suggest direct familiarisation rather than phenotype matching during olfactory recognition in Australian sea lions (Neophoca cinerea). Journal of Experimental Marine Biology and Ecology 517: 49-53. [Plateforme MBB & Plateforme PACE]

Wierucka K, Barthes N, Pitcher BJ, Schaal B, Charrier I, Harcourt RG (2019b) Chemical profiles of integumentary and glandular substrates in Australian sea lion pups (Neophoca cinerea). Chemical Senses 44 (3): 205-214. [Plateforme PACE & Plateforme MBB]